RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ZNF275Q9NSD4 429 aaPredicted RBP18.28■□□□□ 0.52
SSBP3-216ENST00000610401 SLC5A6Q9Y289 635 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 PIAS3Q9Y6X2 628 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 MUC3AQ02505 3323 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 A0A1B0GV50 99 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 H7C2Y5 167 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 CBR1P16152 277 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 SERPINF1P36955 418 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 EGR3Q06889 387 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 PLCXD2Q0VAA5 305 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 RBM39Q14498 530 aaKnown RBP18.28■□□□□ 0.52
SSBP3-216ENST00000610401 ELOCQ15369 112 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 RPS4Y2Q8TD47 263 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 TMEM41AQ96HV5 264 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 LTBP2Q14767 1821 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 WIPF3A6NGB9 483 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 GLI4P10075 376 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 CASRP41180 1078 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 SLC37A1P57057 533 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 CCINQ13939 588 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 CLEC9AQ6UXN8 241 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 Q6ZS52 159 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 ZSCAN1Q8NBB4 408 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 C5orf34Q96MH7 638 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 UTP23Q9BRU9 249 aaKnown RBP18.28■□□□□ 0.52
SSBP3-216ENST00000610401 NUDT9Q9BW91 350 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 GMEB2Q9UKD1 530 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 POLR1DQ9Y2S0 133 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 TUBAL3A6NHL2 446 aa18.27■□□□□ 0.52
SSBP3-216ENST00000610401 CD1AP06126 327 aa18.27■□□□□ 0.52
SSBP3-216ENST00000610401 GP1BBP13224 206 aa18.27■□□□□ 0.52
SSBP3-216ENST00000610401 ID4P47928 161 aa18.27■□□□□ 0.52
SSBP3-216ENST00000610401 POU3F1Q03052 451 aaPredicted RBP18.27■□□□□ 0.52
SSBP3-216ENST00000610401 ADAMTS18Q8TE60 1221 aa18.27■□□□□ 0.52
SSBP3-216ENST00000610401 LRFN5Q96NI6 719 aa18.27■□□□□ 0.52
SSBP3-216ENST00000610401 GPX7Q96SL4 187 aaPredicted RBP18.27■□□□□ 0.52
SSBP3-216ENST00000610401 MRI1Q9BV20 369 aa18.27■□□□□ 0.52
SSBP3-216ENST00000610401 MED19A0JLT2 244 aaPredicted RBP18.27■□□□□ 0.51
SSBP3-216ENST00000610401 OR2T1O43869 369 aa18.27■□□□□ 0.51
SSBP3-216ENST00000610401 ACTL6AO96019 429 aa18.27■□□□□ 0.51
SSBP3-216ENST00000610401 UBBP0CG47 229 aa18.27■□□□□ 0.51
SSBP3-216ENST00000610401 UBCP0CG48 685 aaKnown RBP18.27■□□□□ 0.51
SSBP3-216ENST00000610401 PRSS12P56730 875 aa18.27■□□□□ 0.51
SSBP3-216ENST00000610401 S100A10P60903 97 aa18.27■□□□□ 0.51
SSBP3-216ENST00000610401 RPL27P61353 136 aaKnown RBP18.27■□□□□ 0.51
SSBP3-216ENST00000610401 RPS27AP62979 156 aaKnown RBP18.27■□□□□ 0.51
SSBP3-216ENST00000610401 UBA52P62987 128 aaKnown RBP18.27■□□□□ 0.51
SSBP3-216ENST00000610401 KCTD18Q6PI47 426 aaPredicted RBP18.27■□□□□ 0.51
SSBP3-216ENST00000610401 ADGRE4PQ86SQ3 457 aa18.27■□□□□ 0.51
SSBP3-216ENST00000610401 SLC26A10Q8NG04 563 aa18.27■□□□□ 0.51
SSBP3-216ENST00000610401 LMX1AQ8TE12 382 aa18.27■□□□□ 0.51
SSBP3-216ENST00000610401 RNF128Q8TEB7 428 aa18.27■□□□□ 0.51
SSBP3-216ENST00000610401 GAREM1Q9H706 876 aa18.27■□□□□ 0.51
SSBP3-216ENST00000610401 OR52A1Q9UKL2 312 aa18.27■□□□□ 0.51
SSBP3-216ENST00000610401 HHLA2Q9UM44 414 aa18.27■□□□□ 0.51
SSBP3-216ENST00000610401 MPIG6BO95866 241 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 ABOP16442 354 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 FUT7Q11130 342 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 ETV3LQ6ZN32 361 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 RTL10Q7L3V2 364 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 MAMDC2Q7Z304 686 aaPredicted RBP18.26■□□□□ 0.51
SSBP3-216ENST00000610401 TMEM17Q86X19 198 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 ACKR4Q9NPB9 350 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 PRODH2Q9UF12 536 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 TNFSF18Q9UNG2 199 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 YBX2Q9Y2T7 364 aaKnown RBP18.26■□□□□ 0.51
SSBP3-216ENST00000610401 TMED7-TICAM2A0A0A6YYA0 188 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 SULT1C2O00338 296 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 FBXW4P57775 412 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 LANCL3Q6ZV70 420 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 LDLRAD3Q86YD5 345 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 FBXO17Q96EF6 278 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 CMSS1Q9BQ75 279 aaKnown RBP18.26■□□□□ 0.51
SSBP3-216ENST00000610401 ST6GALNAC5Q9BVH7 336 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 TLNRD1Q9H1K6 362 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 PRMT8Q9NR22 394 aaPredicted RBP18.26■□□□□ 0.51
SSBP3-216ENST00000610401 AQP8O94778 261 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 ZNF432O94892 652 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 GP1BAP07359 652 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 H2BFMP0C1H6 154 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 ZNF735P0CB33 412 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 PVALBP20472 110 aaPredicted RBP18.26■□□□□ 0.51
SSBP3-216ENST00000610401 CDAP32320 146 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 PRTGQ2VWP7 1150 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 AWAT2Q6E213 333 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 FAM71F1Q96KD3 344 aaPredicted RBP18.26■□□□□ 0.51
SSBP3-216ENST00000610401 SMIM3Q9BZL3 60 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 SLC25A32Q9H2D1 315 aa18.26■□□□□ 0.51
SSBP3-216ENST00000610401 DENND4AQ7Z401 1863 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 FBXO24O75426 580 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 EN2P19622 333 aaPredicted RBP18.25■□□□□ 0.51
SSBP3-216ENST00000610401 GLO1Q04760 184 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 H3F3CQ6NXT2 135 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 MKL2Q9ULH7 1088 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 MYO7BQ6PIF6 2116 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 C9orf170A2RU37 121 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 MSGN1A6NI15 193 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 BCL2L11O43521 198 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 CLPSP04118 112 aa18.25■□□□□ 0.51
SSBP3-216ENST00000610401 HOXB5P09067 269 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms