RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TRBV6-6A0A0A6YYG2 114 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 TEX46H3BTG2 121 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 TOR1AO14656 332 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 ZBTB5O15062 677 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 ALDOBP05062 364 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 TDGF1P13385 188 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 TEAD1P28347 426 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 CASP14P31944 242 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 CDKN2CP42773 168 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 SERPINB9P50453 376 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 CCR8P51685 355 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 TDGF1P3P51864 188 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 PLP1P60201 277 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 GLO1Q04760 184 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 SMARCB1Q12824 385 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 TSPAN31Q12999 210 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 ZNF77Q15935 545 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 C5orf64Q2M2E5 130 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 TTC33Q6PID6 262 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 LRRC74BQ6ZQY2 392 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 ZNF429Q86V71 674 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 ZNF433Q8N7K0 673 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 ARIH2OSQ8N7S6 290 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 C8orf31Q8N9H6 132 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 FBXL13Q8NEE6 735 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 NPBQ8NG41 125 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 OR10G9Q8NGN4 311 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 OR1N2Q8NGR9 330 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 ESR2Q92731 530 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 GTF2H4Q92759 462 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 TSNARE1Q96NA8 513 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 CIB1Q99828 191 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 SELENOSQ9BQE4 189 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 C20orf24Q9BUV8 137 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 FAIM2Q9BWQ8 316 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 NDEL1Q9GZM8 345 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 NEUROG2Q9H2A3 272 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 SLC38A1Q9H2H9 487 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 CLMPQ9H6B4 373 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 WDR54Q9H977 334 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 ADAP2Q9NPF8 381 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 C8orf4Q9NR00 106 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 STMN3Q9NZ72 180 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 TP53TG5Q9Y2B4 290 aa2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 PRG3Q9Y2Y8 225 aaPredicted RBP2.8□□□□□ -1.96
SMCHD1-213ENST00000609587 DCAF1Q9Y4B6 1507 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 ADGRL3Q9HAR2 1447 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 MAP3K15Q6ZN16 1313 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 KCNE1BA0A087WTH5 132 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 A0A1W2PPV9 198 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 NKX2-6A6NCS4 301 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 GOLGA6L4A6NEF3 574 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 FABP12A6NFH5 140 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 GOLGA8JA6NMD2 632 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 FAM166BA8MTA8 275 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 ERVV-1B6SEH8 477 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 GOLGA8KD6RF30 607 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 B4GALT5O43286 388 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 FADS2O95864 444 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 GAPDHP04406 335 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 FGF1P05230 155 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 GP1BAP07359 652 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 ANXA5P08758 320 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 GOLGA8HP0CJ92 632 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 IDO1P14902 403 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 PRPS1L1P21108 318 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 CFHR2P36980 270 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 SLC26A3P40879 764 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 YAP1P46937 504 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 NPBWR2P48146 333 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 MRPL19P49406 292 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 LHX2P50458 406 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 PSMD7P51665 324 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 UCNP55089 124 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 ERVS71-1P61550 626 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 CYP24A1Q07973 514 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 RFX4Q33E94 735 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 FRMPD2BQ6IN97 320 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 TRIM40Q6P9F5 258 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 FAM151BQ6UXP7 276 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 PID1Q7Z2X4 250 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 CCNYL1Q8N7R7 359 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 MDS2Q8NDY4 140 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 CCDC54Q8NEL0 328 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 SDR9C7Q8NEX9 313 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 VN1R2Q8NFZ6 395 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 OR4F15Q8NGB8 312 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 OR1L6Q8NGR2 347 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 MCOLN3Q8TDD5 553 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 NAT6Q93015 286 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 C8orf44Q96CB5 159 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 RNF185Q96GF1 192 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 HSFY1Q96LI6 401 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 C12orf42Q96LP6 360 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 GLT1D1Q96MS3 346 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 OR8B4Q96RC9 309 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 SORT1Q99523 831 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 CTRCQ99895 268 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 CENPKQ9BS16 269 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 SLC25A39Q9BZJ4 359 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms