RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 GPANK1O95872 356 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 ECDO95905 644 aaPredicted RBP5.27□□□□□ -1.57
CUX1-220ENST00000607092 TSPAN19P0C672 248 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 IGHV4-38-2P0DP08 117 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 LAP3P28838 519 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 CDAP32320 146 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 AQP2P41181 271 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 HTR5AP47898 357 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 SLC9A3P48764 834 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 PAX2Q02962 417 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 MZT1Q08AG7 82 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 ST3GAL3Q11203 375 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 AQP6Q13520 282 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 FBLN7Q53RD9 439 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 RUNDC3AQ59EK9 446 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 ZNF774Q6NX45 483 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 ERICH5Q6P6B1 374 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 C11orf88Q6PI97 169 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 SLC25A47Q6Q0C1 308 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 FIP1L1Q6UN15 594 aaKnown RBP5.27□□□□□ -1.57
CUX1-220ENST00000607092 FBXW12Q6X9E4 464 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 Q6YL49 198 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 DCDC5Q6ZRR9 648 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 FOXL2NBQ6ZUU3 175 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 CCDC80Q76M96 950 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 COMTD1Q86VU5 262 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 MSRB3Q8IXL7 192 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 BCL6BQ8N143 479 aaPredicted RBP5.27□□□□□ -1.57
CUX1-220ENST00000607092 GALNT4Q8N4A0 578 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 DPP10Q8N608 796 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 SPERTQ8NA61 448 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 ATG16L2Q8NAA4 619 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 CCDC197Q8NCU1 140 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 OR8G5Q8NG78 346 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 OR10S1Q8NGN2 331 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 AKR7LQ8NHP1 331 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 LRRC8CQ8TDW0 803 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 NPRL2Q8WTW4 380 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 STON2Q8WXE9 905 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 LZICQ8WZA0 190 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 NSMAFQ92636 917 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 GTF3AQ92664 365 aaKnown RBP5.27□□□□□ -1.57
CUX1-220ENST00000607092 APOBEC3DQ96AK3 386 aaPredicted RBP5.27□□□□□ -1.57
CUX1-220ENST00000607092 NMD3Q96D46 503 aaKnown RBP5.27□□□□□ -1.57
CUX1-220ENST00000607092 CMBLQ96DG6 245 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 PKP2Q99959 881 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 HCAR1Q9BXC0 346 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 TMEM165Q9HC07 324 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 TCF7L1Q9HCS4 588 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 GCM1Q9NP62 436 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 MEPEQ9NQ76 525 aaPredicted RBP5.27□□□□□ -1.57
CUX1-220ENST00000607092 ERVK-18Q9QC07 812 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 ARL2BPQ9Y2Y0 163 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 RNF114Q9Y508 228 aa5.27□□□□□ -1.57
CUX1-220ENST00000607092 CMYA5Q8N3K9 4069 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 TANC2Q9HCD6 1990 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 A0A1W2PPL8 197 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 ZNF879B4DU55 563 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 TNFRSF13BO14836 293 aaPredicted RBP5.26□□□□□ -1.57
CUX1-220ENST00000607092 DOK2O60496 412 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 CLPXO76031 633 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 LYPD3O95274 346 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 NPPAP01160 153 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 OPN1SWP03999 348 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 CD33P20138 364 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 GATA4P43694 442 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 RAD23AP54725 363 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 LSM6P62312 80 aaKnown RBP5.26□□□□□ -1.57
CUX1-220ENST00000607092 MALLQ13021 153 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 CYLC2Q14093 348 aaPredicted RBP5.26□□□□□ -1.57
CUX1-220ENST00000607092 VMACQ2NL98 169 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 DEFB112Q30KQ8 113 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 ZNF404Q494X3 552 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 AGKQ53H12 422 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 PAGE3Q5JUK9 113 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 METTL11BQ5VVY1 283 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 WDR25Q64LD2 544 aaPredicted RBP5.26□□□□□ -1.57
CUX1-220ENST00000607092 DNM1P34Q6PK57 102 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 FUNDC1Q8IVP5 155 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 RNF113BQ8IZP6 322 aaKnown RBP5.26□□□□□ -1.57
CUX1-220ENST00000607092 KIR3DL3Q8N743 410 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 POU5F2Q8N7G0 328 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 CLDN22Q8N7P3 220 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 FAM156AQ8NDB6 213 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 GPR32P1Q8NGA4 272 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 ITLN1Q8WWA0 313 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 HDAC2Q92769 488 aaKnown RBP5.26□□□□□ -1.57
CUX1-220ENST00000607092 BPIFA2Q96DR5 249 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 EAF1Q96JC9 268 aaPredicted RBP5.26□□□□□ -1.57
CUX1-220ENST00000607092 MEGF10Q96KG7 1140 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 SIGLEC11Q96RL6 698 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 CGREF1Q99674 301 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 RBM4BQ9BQ04 359 aaKnown RBP5.26□□□□□ -1.57
CUX1-220ENST00000607092 ELAC2Q9BQ52 826 aaKnown RBP5.26□□□□□ -1.57
CUX1-220ENST00000607092 PRSS27Q9BQR3 290 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 CPPED1Q9BRF8 314 aaPredicted RBP5.26□□□□□ -1.57
CUX1-220ENST00000607092 SIKE1Q9BRV8 207 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 HDHD2Q9H0R4 259 aa5.26□□□□□ -1.57
CUX1-220ENST00000607092 KAT8Q9H7Z6 458 aaKnown RBP5.26□□□□□ -1.57
CUX1-220ENST00000607092 POLE4Q9NR33 117 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms