RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 SURF4O15260 269 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 FPR2P25090 351 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 CRABP1P29762 137 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 CENPAP49450 140 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 RGS6P49758 472 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 SEC61A1P61619 476 aaKnown RBP6.41□□□□□ -1.38
CUX1-219ENST00000606749 BTG1P62324 171 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 ACTG1P63261 375 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 ZNF154Q13106 437 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 KRT72Q14CN4 511 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 ZMYND11Q15326 602 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 MEP1BQ16820 701 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 RSPO1Q2MKA7 263 aaPredicted RBP6.41□□□□□ -1.38
CUX1-219ENST00000606749 TUSC1Q2TAM9 212 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 RFX4Q33E94 735 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 HSP90B2PQ58FF3 399 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 SLC27A4Q6P1M0 643 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 SMARCD3Q6STE5 483 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 FBXW12Q6X9E4 464 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 OR5AS1Q8N127 324 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 OR6V1Q8N148 313 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 BPIFB2Q8N4F0 458 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 SPICQ8N5J4 248 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 C3orf56Q8N813 242 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 ZDHHC22Q8N966 263 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 ATG16L2Q8NAA4 619 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 DEFB108BQ8NET1 73 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 GJC3Q8NFK1 279 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 OR8G5Q8NG78 346 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 OR13G1Q8NGZ3 307 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 C22orf15Q8WYQ4 148 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 APOBEC3DQ96AK3 386 aaPredicted RBP6.41□□□□□ -1.38
CUX1-219ENST00000606749 PYURFQ96I23 114 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 DHRS1Q96LJ7 313 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 TSSK2Q96PF2 358 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 ERMAPQ96PL5 475 aaPredicted RBP6.41□□□□□ -1.38
CUX1-219ENST00000606749 OR2V2Q96R30 315 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 ELAC2Q9BQ52 826 aaKnown RBP6.41□□□□□ -1.38
CUX1-219ENST00000606749 RBM4Q9BWF3 364 aaKnown RBP6.41□□□□□ -1.38
CUX1-219ENST00000606749 PLA2G12AQ9BZM1 189 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 GORASP2Q9H8Y8 452 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 SRA1Q9HD15 236 aaKnown RBP6.41□□□□□ -1.38
CUX1-219ENST00000606749 SPAG4Q9NPE6 437 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 MED4Q9NPJ6 270 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 ESM1Q9NQ30 184 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 PTTG3PQ9NZH4 202 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 ATPIF1Q9UII2 106 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 B9D1Q9UPM9 204 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 SAMD4AQ9UPU9 718 aaKnown RBP6.41□□□□□ -1.38
CUX1-219ENST00000606749 LHFPL6Q9Y693 200 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 ANK2Q01484 3957 aa6.41□□□□□ -1.38
CUX1-219ENST00000606749 TANC2Q9HCD6 1990 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 IGLV1-36A0A0B4J1U3 117 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 F5H0A9 414 aaPredicted RBP6.4□□□□□ -1.38
CUX1-219ENST00000606749 H0YL77 283 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 IFNL4K9M1U5 179 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 ARPC3O15145 178 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 GMNNO75496 209 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 PPP1R3DO95685 299 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 SEMG1P04279 462 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 WNT2P09544 360 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 ZNF12P17014 697 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 PRDX6P30041 224 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 MDH2P40926 338 aaKnown RBP6.4□□□□□ -1.38
CUX1-219ENST00000606749 SMIM11AP58511 58 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 PAX8Q06710 450 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 DBPQ10586 325 aaPredicted RBP6.4□□□□□ -1.38
CUX1-219ENST00000606749 COX10Q12887 443 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 KRTAP27-1Q3LI81 207 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 OR2T2Q6IF00 324 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 LEG1Q6P5S2 330 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 CORO6Q6QEF8 472 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 COLCA1Q6ZS62 124 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.4□□□□□ -1.38
CUX1-219ENST00000606749 RNF148Q8N7C7 305 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 ZNF420Q8TAQ5 688 aaPredicted RBP6.4□□□□□ -1.38
CUX1-219ENST00000606749 POP5Q969H6 163 aaKnown RBP6.4□□□□□ -1.38
CUX1-219ENST00000606749 MEGF10Q96KG7 1140 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 ZNF582Q96NG8 517 aaPredicted RBP6.4□□□□□ -1.38
CUX1-219ENST00000606749 NMNAT3Q96T66 252 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 COQ7Q99807 217 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 SLC30A2Q9BRI3 323 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 NTN4Q9HB63 628 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 TMEM165Q9HC07 324 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 KRCC1Q9NPI7 259 aaPredicted RBP6.4□□□□□ -1.38
CUX1-219ENST00000606749 DDX28Q9NUL7 540 aaKnown RBP6.4□□□□□ -1.38
CUX1-219ENST00000606749 ADA2Q9NZK5 511 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 NUP50Q9UKX7 468 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 POLR1DQ9Y2S0 133 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 INSIG2Q9Y5U4 225 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 AUP1Q9Y679 476 aa6.4□□□□□ -1.38
CUX1-219ENST00000606749 A0A1B0GWJ7 208 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 OR6C68A6NDL8 312 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 CEACAM18A8MTB9 384 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 A8MXK9 166 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 IQCF6A8MYZ5 107 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 F5H5P2 479 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 MLNRO43193 412 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 IDH3BO43837 385 aa6.39□□□□□ -1.39
CUX1-219ENST00000606749 ZNF205O95201 554 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms