RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CCDC71LQ8N9Z2 235 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 OR2M7Q8NG81 312 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 OR8U1Q8NH10 309 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 MAPK15Q8TD08 544 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 WDR34Q96EX3 536 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 RNF157Q96PX1 679 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 ACCSQ96QU6 501 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 MBOAT4Q96T53 435 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 STACQ99469 402 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 COPS8Q99627 209 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 PAAF1Q9BRP4 392 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 PLA2G12BQ9BX93 195 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 RETNQ9HD89 108 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 ARL15Q9NXU5 204 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 CD84Q9UIB8 345 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 LAMP3Q9UQV4 416 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 ZFP30Q9Y2G7 519 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 FAM96BQ9Y3D0 163 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 MMP24Q9Y5R2 645 aa4.48□□□□□ -1.69
SPTBN1-206ENST00000602898 COL1A2P08123 1366 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 COL4A1P02462 1669 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 KCNE1BA0A087WTH5 132 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 TVP23AA6NH52 213 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 IFITM10A6NMD0 228 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 ANHXE9PGG2 379 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 G3V3Q6 166 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 H0YL77 283 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 RGS14O43566 566 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 SEMA7AO75326 666 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 ATP6AP2O75787 350 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 AP2A2O94973 939 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 HTR2CP28335 458 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 NBL1P41271 181 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 NKX2-1P43699 371 aaPredicted RBP4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 DLX5P56178 289 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 RAP2BP61225 183 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 RANP62826 216 aaKnown RBP4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 CFHR1Q03591 330 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 RPE65Q16518 533 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 SYPL1Q16563 259 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 GCSAMLQ5JQS6 135 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 FCRLAQ7L513 359 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 ZAR1Q86SH2 424 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 Q8N1Y9 231 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 OR4F6Q8NGB9 312 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 OR9Q2Q8NGE9 314 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 IL17DQ8TAD2 202 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 PYCR2Q96C36 320 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 LRRC3BQ96PB8 259 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 F2RL3Q96RI0 385 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 PHB2Q99623 299 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 GINS4Q9BRT9 223 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 SEC11CQ9BY50 192 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 OR51J1Q9H342 316 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 GSTO2Q9H4Y5 243 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 TUBA4BQ9H853 241 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 HRASLSQ9HDD0 168 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF629Q9UEG4 869 aaPredicted RBP4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC22A13Q9Y226 551 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 BAZ2AQ9UIF9 1905 aaKnown RBP4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 LOC100130705A0A1B0GUX0 176 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 C20orf202A1L168 122 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 TRAPPC13A5PLN9 417 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF587BE7ETH6 402 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 MS4A18H0YCH9 400 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 INPP4BO15327 924 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC25A27O95847 323 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 ADCYAP1P18509 176 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 TBPP20226 339 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 RPL22P35268 128 aaKnown RBP4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 GGT2P36268 569 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 EFNA3P52797 238 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 PLP1P60201 277 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 ZP1P60852 638 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 OR4D1Q15615 310 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 RFTN2Q52LD8 501 aaPredicted RBP4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 PYCR3Q53H96 274 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 MESTQ5EB52 335 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 H3F3CQ6NXT2 135 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 TBPL2Q6SJ96 375 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 ALKAL2Q6UX46 152 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 TIFABQ6ZNK6 161 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF605Q86T29 641 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 TMEM135Q86UB9 458 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 PTOV1Q86YD1 416 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 DAW1Q8N136 415 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 BEST4Q8NFU0 473 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 OR51A7Q8NH64 312 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 PIGXQ8TBF5 258 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 ROPN1LQ96C74 230 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 ZBED6CLQ96FA7 236 aaPredicted RBP4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 IL4I1Q96RQ9 567 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 TBX5Q99593 518 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 SYT3Q9BQG1 590 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 CBWD1Q9BRT8 395 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 C16orf70Q9BSU1 422 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 SIK2Q9H0K1 926 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 CPVLQ9H3G5 476 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 IKZF5Q9H5V7 419 aa4.47□□□□□ -1.69
SPTBN1-206ENST00000602898 GPR35Q9HC97 309 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms