RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ATF6BQ99941 703 aa11.96□□□□□ -0.49
RNF40-212ENST00000602784 YIPF3Q9GZM5 350 aa11.96□□□□□ -0.49
RNF40-212ENST00000602784 VCXQ9H320 206 aa11.96□□□□□ -0.49
RNF40-212ENST00000602784 CXorf56Q9H5V9 222 aa11.96□□□□□ -0.49
RNF40-212ENST00000602784 WARS2Q9UGM6 360 aaKnown RBP11.96□□□□□ -0.49
RNF40-212ENST00000602784 LAMP3Q9UQV4 416 aa11.96□□□□□ -0.49
RNF40-212ENST00000602784 GMPPBQ9Y5P6 360 aa11.96□□□□□ -0.49
RNF40-212ENST00000602784 H3BSA7 217 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 FAM157BP0CG42 384 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 PSKH1P11801 424 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 ZNF250P15622 560 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 HTR1FP30939 366 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 RPS27P42677 84 aaKnown RBP11.95□□□□□ -0.5
RNF40-212ENST00000602784 RGS6P49758 472 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 OCLNQ16625 522 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 DEFB113Q30KQ7 82 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 MEDAGQ5VYS4 303 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 TMEM154Q6P9G4 183 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 VHLLQ6RSH7 139 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 SLC16A9Q7RTY1 509 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 BCDIN3DQ7Z5W3 292 aaKnown RBP11.95□□□□□ -0.5
RNF40-212ENST00000602784 ZNF101Q8IZC7 436 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 ZNF555Q8NEP9 628 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 OR10S1Q8NGN2 331 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 OR6N2Q8NGY6 317 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 RHOXF1Q8NHV9 184 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 RNF133Q8WVZ7 376 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 MRPL24Q96A35 216 aaKnown RBP11.95□□□□□ -0.5
RNF40-212ENST00000602784 COG8Q96MW5 612 aa11.95□□□□□ -0.5
RNF40-212ENST00000602784 ZNF701Q9NV72 531 aaPredicted RBP11.95□□□□□ -0.5
RNF40-212ENST00000602784 ZNF878C9JN71 531 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 H0YJX3 145 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 GPRIN2O60269 458 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 SELENOFO60613 162 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 SMPD2O60906 423 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 ABHD16AO95870 558 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 ALOX5APP20292 161 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 OTX1P32242 354 aaPredicted RBP11.94□□□□□ -0.5
RNF40-212ENST00000602784 SLC15A1P46059 708 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 POU4F2Q12837 409 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 EIF2B1Q14232 305 aaKnown RBP11.94□□□□□ -0.5
RNF40-212ENST00000602784 TTC23Q5W5X9 447 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 RGS7BPQ6MZT1 257 aaPredicted RBP11.94□□□□□ -0.5
RNF40-212ENST00000602784 COLCA1Q6ZS62 124 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 LRRC75A-AS1Q8N1F1 130 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 SLC7A6Q92536 515 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 UBE2FQ969M7 185 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 SPTSSAQ969W0 71 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 SLAMF6Q96DU3 332 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 ZNF582Q96NG8 517 aaPredicted RBP11.94□□□□□ -0.5
RNF40-212ENST00000602784 MNTQ99583 582 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 FOXC2Q99958 501 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 APOL4Q9BPW4 351 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 ABHD6Q9BV23 337 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 PLK3Q9H4B4 646 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 GRIP1Q9Y3R0 1128 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 TMEM14AQ9Y6G1 99 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 CSMD2Q7Z408 3487 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 MYO9AB2RTY4 2548 aa11.94□□□□□ -0.5
RNF40-212ENST00000602784 IGLV3-9A0A075B6K5 115 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 TMEM129A0AVI4 362 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 SNTNA6NMZ2 147 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 RRP9O43818 475 aaKnown RBP11.93□□□□□ -0.5
RNF40-212ENST00000602784 NGFP01138 241 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 LCKP06239 509 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 DBHP09172 617 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 ACSM4P0C7M7 580 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 GABRB1P18505 474 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 TPTEP56180 551 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 SELENOVP59797 346 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 PPP1CBP62140 327 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 SNRPD2P62316 118 aaKnown RBP11.93□□□□□ -0.5
RNF40-212ENST00000602784 GRB2P62993 217 aaKnown RBP11.93□□□□□ -0.5
RNF40-212ENST00000602784 ADARB1P78563 741 aaKnown RBP11.93□□□□□ -0.5
RNF40-212ENST00000602784 MSMPQ1L6U9 139 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 ZNF718Q3SXZ3 478 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 MBNL2Q5VZF2 373 aaKnown RBP11.93□□□□□ -0.5
RNF40-212ENST00000602784 DHRSXQ8N5I4 330 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 OR1J1Q8NGS3 322 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 ABHD4Q8TB40 342 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 ASB17Q8WXJ9 295 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 APOBEC3DQ96AK3 386 aaPredicted RBP11.93□□□□□ -0.5
RNF40-212ENST00000602784 MARS2Q96GW9 593 aaKnown RBP11.93□□□□□ -0.5
RNF40-212ENST00000602784 Q96MT0 163 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 CNN2Q99439 309 aaKnown RBP11.93□□□□□ -0.5
RNF40-212ENST00000602784 DOK1Q99704 481 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 KCNJ15Q99712 375 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 C1QTNF5Q9BXJ0 243 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 GSX2Q9BZM3 304 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 ADGRL4Q9HBW9 690 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 DNAJC27Q9NZQ0 273 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.93□□□□□ -0.5
RNF40-212ENST00000602784 PMF1-BGLAPU3KQ54 211 aa11.93□□□□□ -0.5
RNF40-212ENST00000602784 CREBBPQ92793 2442 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 ARID1AO14497 2285 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 F5H5K5 113 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 H0YAE9 185 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 H7C417 338 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 ENTPD6O75354 484 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 IGHV3-13P01766 116 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms