RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 ZCCHC24Q8N2G6 241 aaKnown RBP16.59■□□□□ 0.25
UPF1-212ENST00000601689 CIARTQ8N365 385 aaPredicted RBP16.59■□□□□ 0.25
UPF1-212ENST00000601689 PARP8Q8N3A8 854 aa16.59■□□□□ 0.25
UPF1-212ENST00000601689 IQCF1Q8N6M8 205 aa16.59■□□□□ 0.25
UPF1-212ENST00000601689 OR51L1Q8NGJ5 315 aa16.59■□□□□ 0.25
UPF1-212ENST00000601689 PTP4A1Q93096 173 aa16.59■□□□□ 0.25
UPF1-212ENST00000601689 CENPNQ96H22 339 aaPredicted RBP16.59■□□□□ 0.25
UPF1-212ENST00000601689 DIRC2Q96SL1 478 aa16.59■□□□□ 0.25
UPF1-212ENST00000601689 OSBPL10Q9BXB5 764 aa16.59■□□□□ 0.25
UPF1-212ENST00000601689 NTN4Q9HB63 628 aa16.59■□□□□ 0.25
UPF1-212ENST00000601689 TVP23AA6NH52 213 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 F5H5K5 113 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 LY6HO94772 140 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 NGFP01138 241 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 GYPBP06028 91 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 SPARCP09486 303 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 SLC15A1P46059 708 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 ZNF81P51508 661 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 CRISP1P54107 249 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 ACTR3P61158 418 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 CDK5Q00535 292 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 MALLQ13021 153 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 MAD2L1BPQ15013 274 aaPredicted RBP16.58■□□□□ 0.24
UPF1-212ENST00000601689 SNAPC1Q16533 368 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 MSMPQ1L6U9 139 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 RFPL4BQ6ZWI9 263 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 SHFQ7M4L6 423 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 AMIGO2Q86SJ2 522 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 ZNF786Q8N393 782 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 LRTOMTQ8WZ04 291 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 EGLN1Q9GZT9 426 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 OR51V1Q9H2C8 321 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 NKIRAS2Q9NYR9 191 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 MYEF2Q9P2K5 600 aaKnown RBP16.58■□□□□ 0.24
UPF1-212ENST00000601689 ZDHHC8Q9ULC8 765 aa16.58■□□□□ 0.24
UPF1-212ENST00000601689 ZNF593O00488 134 aaPredicted RBP16.57■□□□□ 0.24
UPF1-212ENST00000601689 SURF4O15260 269 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 GLCEO94923 617 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 HEXAP06865 529 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 USF1P22415 310 aaPredicted RBP16.57■□□□□ 0.24
UPF1-212ENST00000601689 TNFSF4P23510 183 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 GSTT1P30711 240 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 GGT2P36268 569 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 RPS7P62081 194 aaKnown RBP16.57■□□□□ 0.24
UPF1-212ENST00000601689 KLHL12Q53G59 568 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 ACSM5Q6NUN0 579 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 FAHD1Q6P587 224 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 RDH5Q92781 318 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 INTS14Q96SY0 518 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 HCAR1Q9BXC0 346 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 NMNAT2Q9BZQ4 307 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 SLC25A19Q9HC21 320 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 MRPL22Q9NWU5 206 aaKnown RBP16.57■□□□□ 0.24
UPF1-212ENST00000601689 H2AFY2Q9P0M6 372 aaPredicted RBP16.57■□□□□ 0.24
UPF1-212ENST00000601689 ORC6Q9Y5N6 252 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 COMMD3-BMI1R4GMX3 469 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 ACANP16112 2415 aa16.57■□□□□ 0.24
UPF1-212ENST00000601689 FAM183AA6NL82 134 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 PRODHO43272 600 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 APOC1P02654 83 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 SLC6A9P48067 706 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 DAPP51397 102 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 MRPS11P82912 194 aaKnown RBP16.56■□□□□ 0.24
UPF1-212ENST00000601689 PPP2R2BQ00005 443 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 LOXL1Q08397 574 aaPredicted RBP16.56■□□□□ 0.24
UPF1-212ENST00000601689 TEX30Q5JUR7 227 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 SLC35D3Q5M8T2 416 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 PLBD1Q6P4A8 553 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 CFAP77Q6ZQR2 320 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 DCXRQ7Z4W1 244 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 ERI1Q8IV48 349 aaKnown RBP16.56■□□□□ 0.24
UPF1-212ENST00000601689 ZNF511Q8NB15 262 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 OR6N2Q8NGY6 317 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 SLC7A6Q92536 515 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 COPS4Q9BT78 406 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 SEMA6AQ9H2E6 1030 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 GSX1Q9H4S2 264 aaPredicted RBP16.56■□□□□ 0.24
UPF1-212ENST00000601689 SP140LQ9H930 580 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 CHODLQ9H9P2 273 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 CENPMQ9NSP4 180 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 TVP23BQ9NYZ1 205 aa16.56■□□□□ 0.24
UPF1-212ENST00000601689 ZNF878C9JN71 531 aa16.55■□□□□ 0.24
UPF1-212ENST00000601689 LCATP04180 440 aa16.55■□□□□ 0.24
UPF1-212ENST00000601689 DBHP09172 617 aa16.55■□□□□ 0.24
UPF1-212ENST00000601689 CLUP10909 449 aa16.55■□□□□ 0.24
UPF1-212ENST00000601689 RAC2P15153 192 aa16.55■□□□□ 0.24
UPF1-212ENST00000601689 SELEP16581 610 aa16.55■□□□□ 0.24
UPF1-212ENST00000601689 ACHEP22303 614 aa16.55■□□□□ 0.24
UPF1-212ENST00000601689 NR4A2P43354 598 aa16.55■□□□□ 0.24
UPF1-212ENST00000601689 GGTLC2Q14390 218 aa16.55■□□□□ 0.24
UPF1-212ENST00000601689 KPNB1Q14974 876 aaKnown RBP16.55■□□□□ 0.24
UPF1-212ENST00000601689 PTGES3Q15185 160 aaKnown RBP16.55■□□□□ 0.24
UPF1-212ENST00000601689 PYDC1Q8WXC3 89 aa16.55■□□□□ 0.24
UPF1-212ENST00000601689 CMBLQ96DG6 245 aa16.55■□□□□ 0.24
UPF1-212ENST00000601689 RBM4BQ9BQ04 359 aaKnown RBP16.55■□□□□ 0.24
UPF1-212ENST00000601689 GABARAPL1Q9H0R8 117 aa16.55■□□□□ 0.24
UPF1-212ENST00000601689 SAP30LQ9HAJ7 183 aa16.55■□□□□ 0.24
UPF1-212ENST00000601689 STARD10Q9Y365 291 aa16.55■□□□□ 0.24
UPF1-212ENST00000601689 TEP1Q99973 2627 aaKnown RBP16.55■□□□□ 0.24
UPF1-212ENST00000601689 M0R135 149 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms