RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 GLB1L2Q8IW92 636 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 C1orf87Q8N0U7 546 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 OR5AS1Q8N127 324 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 OR8B3Q8NGG8 313 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 SLC7A6Q92536 515 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 APOBEC3DQ96AK3 386 aaPredicted RBP17.71■□□□□ 0.43
PNKP-212ENST00000599454 TMIGD2Q96BF3 282 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 ZNF582Q96NG8 517 aaPredicted RBP17.71■□□□□ 0.43
PNKP-212ENST00000599454 OR8B2Q96RD0 313 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 RHCGQ9UBD6 479 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 ASH2LQ9UBL3 628 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 TMEM5Q9Y2B1 443 aa17.71■□□□□ 0.43
PNKP-212ENST00000599454 A0A087WUU8 490 aa17.7■□□□□ 0.42
PNKP-212ENST00000599454 TRAV40A0A0B4J280 105 aa17.7■□□□□ 0.42
PNKP-212ENST00000599454 KIR2DS1A0A191URI9 304 aa17.7■□□□□ 0.42
PNKP-212ENST00000599454 KHDRBS3O75525 346 aaKnown RBP17.7■□□□□ 0.42
PNKP-212ENST00000599454 FUT4P22083 530 aa17.7■□□□□ 0.42
PNKP-212ENST00000599454 BPIFB3P59826 476 aa17.7■□□□□ 0.42
PNKP-212ENST00000599454 KLF10Q13118 480 aa17.7■□□□□ 0.42
PNKP-212ENST00000599454 CCDC92Q53HC0 331 aaPredicted RBP17.7■□□□□ 0.42
PNKP-212ENST00000599454 ZNF362Q5T0B9 420 aaPredicted RBP17.7■□□□□ 0.42
PNKP-212ENST00000599454 SPATC1Q76KD6 591 aa17.7■□□□□ 0.42
PNKP-212ENST00000599454 POU5F2Q8N7G0 328 aa17.7■□□□□ 0.42
PNKP-212ENST00000599454 OR10AD1Q8NGE0 317 aa17.7■□□□□ 0.42
PNKP-212ENST00000599454 ZNF420Q8TAQ5 688 aaPredicted RBP17.7■□□□□ 0.42
PNKP-212ENST00000599454 TMEM246Q9BRR3 403 aa17.7■□□□□ 0.42
PNKP-212ENST00000599454 TMEM120AQ9BXJ8 343 aa17.7■□□□□ 0.42
PNKP-212ENST00000599454 PRDM13Q9H4Q3 707 aa17.7■□□□□ 0.42
PNKP-212ENST00000599454 ANKRD19PQ9H560 264 aa17.7■□□□□ 0.42
PNKP-212ENST00000599454 PTTG3PQ9NZH4 202 aa17.7■□□□□ 0.42
PNKP-212ENST00000599454 IGHV3OR16-10A0A075B7F0 116 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 CDC42EP2O14613 210 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 FFAR1O14842 300 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 GPANK1O95872 356 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 CYB5R3P00387 301 aaPredicted RBP17.69■□□□□ 0.42
PNKP-212ENST00000599454 MDKP21741 143 aaPredicted RBP17.69■□□□□ 0.42
PNKP-212ENST00000599454 SDHAP31040 664 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 GPR4P46093 362 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 KRR1Q13601 381 aaKnown RBP17.69■□□□□ 0.42
PNKP-212ENST00000599454 ZNF404Q494X3 552 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 GPR139Q6DWJ6 353 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 OR2T2Q6IF00 324 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 PGM2L1Q6PCE3 622 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 RRM2BQ7LG56 351 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 VTCN1Q7Z7D3 282 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 SLC30A2Q9BRI3 323 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 SYT4Q9H2B2 425 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 NMNAT1Q9HAN9 279 aaPredicted RBP17.69■□□□□ 0.42
PNKP-212ENST00000599454 SNX13Q9Y5W8 968 aa17.69■□□□□ 0.42
PNKP-212ENST00000599454 IQCF6A8MYZ5 107 aa17.68■□□□□ 0.42
PNKP-212ENST00000599454 J3KTA2 159 aa17.68■□□□□ 0.42
PNKP-212ENST00000599454 SLC16A7O60669 478 aa17.68■□□□□ 0.42
PNKP-212ENST00000599454 PITPNBP48739 271 aa17.68■□□□□ 0.42
PNKP-212ENST00000599454 HLXQ14774 488 aaPredicted RBP17.68■□□□□ 0.42
PNKP-212ENST00000599454 KCNMB1Q16558 191 aa17.68■□□□□ 0.42
PNKP-212ENST00000599454 ADCK1Q86TW2 530 aa17.68■□□□□ 0.42
PNKP-212ENST00000599454 ZDHHC16Q969W1 377 aa17.68■□□□□ 0.42
PNKP-212ENST00000599454 GPX7Q96SL4 187 aaPredicted RBP17.68■□□□□ 0.42
PNKP-212ENST00000599454 COQ7Q99807 217 aa17.68■□□□□ 0.42
PNKP-212ENST00000599454 NUDT16L1Q9BRJ7 211 aaKnown RBP17.68■□□□□ 0.42
PNKP-212ENST00000599454 HDHD2Q9H0R4 259 aa17.68■□□□□ 0.42
PNKP-212ENST00000599454 VSX1Q9NZR4 365 aaPredicted RBP17.68■□□□□ 0.42
PNKP-212ENST00000599454 CLN8Q9UBY8 286 aa17.68■□□□□ 0.42
PNKP-212ENST00000599454 COA3Q9Y2R0 106 aaPredicted RBP17.68■□□□□ 0.42
PNKP-212ENST00000599454 SRRM5B3KS81 715 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 PHYHO14832 338 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 RER1O15258 196 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 NDUFB2O95178 105 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 ZNF205O95201 554 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 DBHP09172 617 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 SELEP16581 610 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 ZNF26P17031 533 aaPredicted RBP17.67■□□□□ 0.42
PNKP-212ENST00000599454 GATA4P43694 442 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 IFI44LQ53G44 452 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 TBPL2Q6SJ96 375 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 ARPINQ7Z6K5 226 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 MOGAT3Q86VF5 341 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 GJC3Q8NFK1 279 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 OR10S1Q8NGN2 331 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 OR4F5Q8NH21 305 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 ERGIC1Q969X5 290 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 RERGLQ9H628 205 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 NOX4Q9NPH5 578 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 NRIP3Q9NQ35 241 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 SAR1AQ9NR31 198 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 TMEM100Q9NV29 134 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 POLR1DQ9Y2S0 133 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 SOX21Q9Y651 276 aaPredicted RBP17.67■□□□□ 0.42
PNKP-212ENST00000599454 NOTCH1P46531 2555 aa17.67■□□□□ 0.42
PNKP-212ENST00000599454 A0A1B0GWJ7 208 aa17.66■□□□□ 0.42
PNKP-212ENST00000599454 H0YL77 283 aa17.66■□□□□ 0.42
PNKP-212ENST00000599454 MLNRO43193 412 aa17.66■□□□□ 0.42
PNKP-212ENST00000599454 HOXA3O43365 443 aaPredicted RBP17.66■□□□□ 0.42
PNKP-212ENST00000599454 ZNF682O95780 498 aa17.66■□□□□ 0.42
PNKP-212ENST00000599454 IRF2P14316 349 aa17.66■□□□□ 0.42
PNKP-212ENST00000599454 GPR157Q5UAW9 335 aa17.66■□□□□ 0.42
PNKP-212ENST00000599454 DCDC5Q6ZRR9 648 aa17.66■□□□□ 0.42
PNKP-212ENST00000599454 JAZF1Q86VZ6 243 aa17.66■□□□□ 0.42
PNKP-212ENST00000599454 CYP4Z1Q86W10 505 aa17.66■□□□□ 0.42
PNKP-212ENST00000599454 FITM2Q8N6M3 262 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms