RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.72□□□□□ -0.53
SCAF1-203ENST00000598359 ALDH16A1Q8IZ83 802 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 LINC01356Q8N9X3 169 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 OR2T29Q8NH02 315 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 KLF14Q8TD94 323 aaPredicted RBP11.72□□□□□ -0.53
SCAF1-203ENST00000598359 SLC7A6Q92536 515 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 HPS1Q92902 700 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 TSSK2Q96PF2 358 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 RBM4BQ9BQ04 359 aaKnown RBP11.72□□□□□ -0.53
SCAF1-203ENST00000598359 RBM4Q9BWF3 364 aaKnown RBP11.72□□□□□ -0.53
SCAF1-203ENST00000598359 MRPS26Q9BYN8 205 aaKnown RBP11.72□□□□□ -0.53
SCAF1-203ENST00000598359 FAM192AQ9GZU8 254 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 NRIP3Q9NQ35 241 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 GPR160Q9UJ42 338 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 COA3Q9Y2R0 106 aaPredicted RBP11.72□□□□□ -0.53
SCAF1-203ENST00000598359 PCDHGB5Q9Y5G0 923 aa11.72□□□□□ -0.53
SCAF1-203ENST00000598359 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.71□□□□□ -0.535e-8■■□□□ 13.1
SCAF1-203ENST00000598359 ZSCAN5BA6NJL1 495 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 TRIM64CA6NLI5 447 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 FAM157AC9JC47 383 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 DOK2O60496 412 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 GADD45GO95257 159 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 PPP1R3DO95685 299 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 IGHV1-46P01743 117 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 GCH1P30793 250 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 SDHAP31040 664 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 CDKN2AP42771 156 aaKnown RBP11.71□□□□□ -0.53
SCAF1-203ENST00000598359 HTR5AP47898 357 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 ZNF81P51508 661 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 MMP15P51511 669 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 MVKQ03426 396 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 RFX4Q33E94 735 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 SPRNQ5BIV9 151 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 ZER1Q7Z7L7 766 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 TMEM158Q8WZ71 300 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 C4orf45Q96LM5 186 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 NDEL1Q9GZM8 345 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 NUAK2Q9H093 628 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 RACGAP1Q9H0H5 632 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 VNN3Q9NY84 501 aa11.71□□□□□ -0.53
SCAF1-203ENST00000598359 IGHV1-69-2A0A0G2JMI3 117 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 DCTN6O00399 190 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 GNGT2O14610 69 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 SGCEO43556 437 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 CENPAP49450 140 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 TMEM33P57088 247 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 MEP1BQ16820 701 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 PCGF3Q3KNV8 242 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 MBNL2Q5VZF2 373 aaKnown RBP11.7□□□□□ -0.54
SCAF1-203ENST00000598359 GPR139Q6DWJ6 353 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 C1orf94Q6P1W5 598 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 SMARCD3Q6STE5 483 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 DPY19L2P2Q6ZN68 376 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 VASH1Q7L8A9 365 aaPredicted RBP11.7□□□□□ -0.54
SCAF1-203ENST00000598359 TMEM179BQ7Z7N9 219 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 FANK1Q8TC84 345 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 C1orf159Q96HA4 380 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 ERMAPQ96PL5 475 aaPredicted RBP11.7□□□□□ -0.54
SCAF1-203ENST00000598359 GPX7Q96SL4 187 aaPredicted RBP11.7□□□□□ -0.54
SCAF1-203ENST00000598359 YTHDF1Q9BYJ9 559 aaKnown RBP11.7□□□□□ -0.54
SCAF1-203ENST00000598359 MSL2Q9HCI7 577 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 DECR2Q9NUI1 292 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 VSX1Q9NZR4 365 aaPredicted RBP11.7□□□□□ -0.54
SCAF1-203ENST00000598359 ASH2LQ9UBL3 628 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 ANK2Q01484 3957 aa11.7□□□□□ -0.54
SCAF1-203ENST00000598359 AHCYL1O43865 530 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 KHDRBS3O75525 346 aaKnown RBP11.69□□□□□ -0.54
SCAF1-203ENST00000598359 ABHD16AO95870 558 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 DBHP09172 617 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 ITGA2P17301 1181 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 HNF1AP20823 631 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 RRM2P31350 389 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 CRYBB2P43320 205 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 LMO4P61968 165 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 MRPS11P82912 194 aaKnown RBP11.69□□□□□ -0.54
SCAF1-203ENST00000598359 PSG7Q13046 419 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 TTC23Q5W5X9 447 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 SYT9Q86SS6 491 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 GLB1L2Q8IW92 636 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 SAMD8Q96LT4 415 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 MBOAT4Q96T53 435 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 SAP30LQ9HAJ7 183 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 KRCC1Q9NPI7 259 aaPredicted RBP11.69□□□□□ -0.54
SCAF1-203ENST00000598359 NKIRAS2Q9NYR9 191 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 PLEK2Q9NYT0 353 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 NDUFA13Q9P0J0 144 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 TMEFF2Q9UIK5 374 aaPredicted RBP11.69□□□□□ -0.54
SCAF1-203ENST00000598359 MYRFQ9Y2G1 1151 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 STARD10Q9Y365 291 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 GRIP1Q9Y3R0 1128 aa11.69□□□□□ -0.54
SCAF1-203ENST00000598359 SMIM31A0A1B0GVY4 71 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 PLSCR5A0PG75 271 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 B4DSR2 109 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 E9PQ18 207 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 RER1O15258 196 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 SLC16A6O15403 523 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 TIMM8AO60220 97 aaPredicted RBP11.68□□□□□ -0.54
SCAF1-203ENST00000598359 OR10H3O60404 316 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 ICMTO60725 284 aa11.68□□□□□ -0.54
SCAF1-203ENST00000598359 E2F6O75461 281 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms