RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 NOX4Q9NPH5 578 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 ARL8BQ9NVJ2 186 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 AURKAIP1Q9NWT8 199 aaPredicted RBP12.93□□□□□ -0.34
LIG1-214ENST00000597146 IL20RAQ9UHF4 553 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 AURKCQ9UQB9 309 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 TMEM5Q9Y2B1 443 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 V9GYQ6 96 aa12.93□□□□□ -0.34
LIG1-214ENST00000597146 IQCMA0A1B0GVH7 501 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 A6NIZ1 184 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 CEACAM18A8MTB9 384 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 OPN1MWP04001 364 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 PGA4P0DJD7 388 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 PGA3P0DJD8 388 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 OPN1MW2P0DN77 364 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 OPN1MW3P0DN78 364 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 RHCEP18577 417 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 RAP1BP61224 184 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 RPL27P61353 136 aaKnown RBP12.92□□□□□ -0.34
LIG1-214ENST00000597146 RAP1AP62834 184 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 HSF2Q03933 536 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 ANKDD1AQ495B1 522 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 THEM4Q5T1C6 240 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 TBPL2Q6SJ96 375 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 MBOAT2Q6ZWT7 520 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 LRRC28Q86X40 367 aaPredicted RBP12.92□□□□□ -0.34
LIG1-214ENST00000597146 C1orf174Q8IYL3 243 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 ZNF101Q8IZC7 436 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 PGAM4Q8N0Y7 254 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 LRRC18Q8N456 261 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 FAM156AQ8NDB6 213 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 OR4K5Q8NGD3 323 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 OR1J2Q8NGS2 313 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 ASB10Q8WXI3 467 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 DYRK2Q92630 601 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 DACT3Q96B18 629 aaPredicted RBP12.92□□□□□ -0.34
LIG1-214ENST00000597146 NSMCE2Q96MF7 247 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 SIGLEC11Q96RL6 698 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 SSBP3Q9BWW4 388 aaPredicted RBP12.92□□□□□ -0.34
LIG1-214ENST00000597146 DCAF13Q9NV06 445 aaKnown RBP12.92□□□□□ -0.34
LIG1-214ENST00000597146 TMEM38BQ9NVV0 291 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 ABCD2Q9UBJ2 740 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 GRHPRQ9UBQ7 328 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 MAGEL2Q9UJ55 1249 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 LRCH1Q9Y2L9 728 aa12.92□□□□□ -0.34
LIG1-214ENST00000597146 TRAV27A0A087WT01 109 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 B2RBV5 119 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 CENPBD1B2RD01 187 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 XKRYO14609 159 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 MGRN1O60291 552 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 ADH4P08319 380 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 CCNOP22674 350 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 MSX2P35548 267 aaPredicted RBP12.91□□□□□ -0.34
LIG1-214ENST00000597146 SLC9A3P48764 834 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 TNFAIP6P98066 277 aaPredicted RBP12.91□□□□□ -0.34
LIG1-214ENST00000597146 ZNF774Q6NX45 483 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 Q6ZSV7 163 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 IGFN1Q86VF2 1251 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 DEFB107AQ8IZN7 70 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 ZNF283Q8N7M2 679 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 CCDC197Q8NCU1 140 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 NOXO1Q8NFA2 376 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 FNDC8Q8TC99 324 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 MARS2Q96GW9 593 aaKnown RBP12.91□□□□□ -0.34
LIG1-214ENST00000597146 PYURFQ96I23 114 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 NSL1Q96IY1 281 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 C1orf198Q9H425 327 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 ANKRD19PQ9H560 264 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 GORASP2Q9H8Y8 452 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 HIF3AQ9Y2N7 669 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 POMT1Q9Y6A1 747 aa12.91□□□□□ -0.34
LIG1-214ENST00000597146 DYNC2H1Q8NCM8 4307 aaKnown RBP12.9□□□□□ -0.34
LIG1-214ENST00000597146 A0A087WUU8 490 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 FFAR1O14842 300 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 IGHV4-59P01825 116 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 CD55P08174 381 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 WNT5AP41221 380 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 GPR4P46093 362 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 RPL15P61313 204 aaKnown RBP12.9□□□□□ -0.34
LIG1-214ENST00000597146 ZNF718Q3SXZ3 478 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 ZBED5Q49AG3 693 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 OXLD1Q5BKU9 147 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 GPR157Q5UAW9 335 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 CCBE1Q6UXH8 406 aaPredicted RBP12.9□□□□□ -0.34
LIG1-214ENST00000597146 RBM15BQ8NDT2 890 aaKnown RBP12.9□□□□□ -0.34
LIG1-214ENST00000597146 OR13C2Q8NGS9 318 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 OR52J3Q8NH60 311 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 SLC25A40Q8TBP6 338 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 RAB40AQ8WXH6 277 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 FAM71F1Q96KD3 344 aaPredicted RBP12.9□□□□□ -0.34
LIG1-214ENST00000597146 OR2J1Q9GZK6 312 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 SIAEQ9HAT2 523 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 TMCC3Q9ULS5 477 aa12.9□□□□□ -0.34
LIG1-214ENST00000597146 DIRAS1O95057 198 aa12.89□□□□□ -0.35
LIG1-214ENST00000597146 WNT2P09544 360 aa12.89□□□□□ -0.35
LIG1-214ENST00000597146 HSD17B1P14061 328 aa12.89□□□□□ -0.35
LIG1-214ENST00000597146 RPS2P15880 293 aaKnown RBP12.89□□□□□ -0.35
LIG1-214ENST00000597146 APLNRP35414 380 aa12.89□□□□□ -0.35
LIG1-214ENST00000597146 MDH2P40926 338 aaKnown RBP12.89□□□□□ -0.35
LIG1-214ENST00000597146 FGF12P61328 243 aa12.89□□□□□ -0.35
LIG1-214ENST00000597146 ERVK-25P63136 954 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms