RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 POLR2IP36954 125 aaKnown RBP9.52□□□□□ -0.89
VRK3-210ENST00000596121 MAGEB1P43366 347 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 MMP15P51511 669 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 ARHGDIAP52565 204 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 KLF3P57682 345 aaPredicted RBP9.52□□□□□ -0.89
VRK3-210ENST00000596121 PSG7Q13046 419 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 HNRNPA0Q13151 305 aaKnown RBP9.52□□□□□ -0.89
VRK3-210ENST00000596121 SPRNQ5BIV9 151 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 MBNL2Q5VZF2 373 aaKnown RBP9.52□□□□□ -0.89
VRK3-210ENST00000596121 HIPK1Q86Z02 1210 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 CPOQ8IVL8 374 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 PARP8Q8N3A8 854 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 FAM168AQ92567 244 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 CENPNQ96H22 339 aaPredicted RBP9.52□□□□□ -0.89
VRK3-210ENST00000596121 COQ7Q99807 217 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 RHNO1Q9BSD3 238 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 RAB1BQ9H0U4 201 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 MARCH7Q9H992 704 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 TBCCD1Q9NVR7 557 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 POLR1DQ9Y2S0 133 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 ABCA1O95477 2261 aa9.52□□□□□ -0.89
VRK3-210ENST00000596121 ZSCAN5BA6NJL1 495 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 SAC3D1A6NKF1 404 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 PRKYO43930 277 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 ACSM4P0C7M7 580 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 ZNF823P16415 610 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 ZNF23P17027 643 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 ZNF3P17036 446 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 SLC2A5P22732 501 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 COL8A2P25067 703 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 FMO3P31513 532 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 RBMXP38159 391 aaKnown RBP9.51□□□□□ -0.89
VRK3-210ENST00000596121 EFNB1P98172 346 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 PPP2R2BQ00005 443 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 HLXQ14774 488 aaPredicted RBP9.51□□□□□ -0.89
VRK3-210ENST00000596121 PTGES3Q15185 160 aaKnown RBP9.51□□□□□ -0.89
VRK3-210ENST00000596121 ZNF718Q3SXZ3 478 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 TEX30Q5JUR7 227 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 CLEC2AQ6UVW9 174 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 COLCA1Q6ZS62 124 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 BCDIN3DQ7Z5W3 292 aaKnown RBP9.51□□□□□ -0.89
VRK3-210ENST00000596121 BIVMQ86UB2 503 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 TIGD4Q8IY51 512 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 OR6K6Q8NGW6 343 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 OR2AJ1Q8NGZ0 328 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 ST7LQ8TDW4 575 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 NEU4Q8WWR8 484 aaPredicted RBP9.51□□□□□ -0.89
VRK3-210ENST00000596121 YIPF5Q969M3 257 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 OTULINQ96BN8 352 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 CMBLQ96DG6 245 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 ZMYND19Q96E35 227 aaPredicted RBP9.51□□□□□ -0.89
VRK3-210ENST00000596121 AMELYQ99218 206 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 PITX2Q99697 317 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 CIB1Q99828 191 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 CDADC1Q9BWV3 514 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 HDHD2Q9H0R4 259 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 OR51V1Q9H2C8 321 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 MS4A5Q9H3V2 200 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 ELOVL3Q9HB03 270 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 TVP23BQ9NYZ1 205 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 ATPIF1Q9UII2 106 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 KCNG2Q9UJ96 466 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 OAZ3Q9UMX2 235 aa9.51□□□□□ -0.89
VRK3-210ENST00000596121 NIPBLQ6KC79 2804 aaeCLIP9.5□□□□□ -0.89
VRK3-210ENST00000596121 NSD1Q96L73 2696 aaPredicted RBP9.5□□□□□ -0.89
VRK3-210ENST00000596121 C17orf100A8MU93 164 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 F5H5K5 113 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 RRP9O43818 475 aaKnown RBP9.5□□□□□ -0.89
VRK3-210ENST00000596121 SELENOFO60613 162 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 GLCEO94923 617 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 HMGN1P05114 100 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 SPARCP09486 303 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 FCGR1AP12314 374 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 GSTT1P30711 240 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 ENTPD1P49961 510 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 PRSS12P56730 875 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 DSCR9P59020 149 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 CARTPTQ16568 116 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 NKPD1Q17RQ9 610 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 SLX4IPQ5VYV7 408 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 CLEC9AQ6UXN8 241 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 Q6ZR03 302 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 SPATC1Q76KD6 591 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 DPY19L4Q7Z388 723 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 DCXRQ7Z4W1 244 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 ZDHHC13Q8IUH4 622 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 UBASH3BQ8TF42 649 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 DNAJC9Q8WXX5 260 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 DCLRE1CQ96SD1 692 aaKnown RBP9.5□□□□□ -0.89
VRK3-210ENST00000596121 OSBPL10Q9BXB5 764 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 C1QTNF5Q9BXJ0 243 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 KRT84Q9NSB2 600 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 SLCO1C1Q9NYB5 712 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 PTTG3PQ9NZH4 202 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 KIF17Q9P2E2 1029 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 FBXO9Q9UK97 447 aaPredicted RBP9.5□□□□□ -0.89
VRK3-210ENST00000596121 KLHDC2Q9Y2U9 406 aa9.5□□□□□ -0.89
VRK3-210ENST00000596121 SONP18583 2426 aaKnown RBP9.5□□□□□ -0.89
VRK3-210ENST00000596121 IGHV4-61A0A0C4DH41 118 aa9.49□□□□□ -0.89
VRK3-210ENST00000596121 CCDC182A6NF36 153 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms