RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 C1orf174Q8IYL3 243 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 ZNF511Q8NB15 262 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 PROKR2Q8NFJ6 384 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 GJC3Q8NFK1 279 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 OR2T4Q8NH00 348 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 TEX47Q8TBZ9 253 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 UBASH3BQ8TF42 649 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 YIPF5Q969M3 257 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 DUS3LQ96G46 650 aaKnown RBP9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 POM121Q96HA1 1249 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 COQ7Q99807 217 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 PIMREGQ9BSJ6 248 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 HDHD2Q9H0R4 259 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 MED20Q9H944 212 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 WDR76Q9H967 626 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 ELOVL3Q9HB03 270 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 SLCO1C1Q9NYB5 712 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 STARD10Q9Y365 291 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 GRIP1Q9Y3R0 1128 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 COMMD3-BMI1R4GMX3 469 aa9.37□□□□□ -0.91
SHKBP1-206ENST00000595523 ARHGAP32A7KAX9 2087 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 ZSCAN5BA6NJL1 495 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 INAFM1C9JVW0 142 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 CD5LO43866 347 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 DEAF1O75398 565 aaPredicted RBP9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 RP2O75695 350 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 HLA-DQA2P01906 255 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 OSMP13725 252 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 ANXA8P13928 327 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 USF1P22415 310 aaPredicted RBP9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 GCH1P30793 250 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 DAPP51397 102 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 SELENOVP59797 346 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 CCL8P80075 99 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 CDK5Q00535 292 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 PSG7Q13046 419 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 GGTLC2Q14390 218 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 GINS1Q14691 196 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 TRIP10Q15642 601 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 PCK2Q16822 640 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 SPRNQ5BIV9 151 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 SLC27A4Q6P1M0 643 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 UNQ6126/PRO20091Q6UXV3 157 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 COLCA1Q6ZS62 124 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 PTP4A1Q93096 173 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 NRBF2Q96F24 287 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 SOX7Q9BT81 388 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 KCNG2Q9UJ96 466 aa9.36□□□□□ -0.91
SHKBP1-206ENST00000595523 RIIAD1A6NNX1 92 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 SURF4O15260 269 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 LILRA1O75019 489 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 IFNGP01579 166 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 IGHV1-46P01743 117 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 TACSTD2P09758 323 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 ACSM4P0C7M7 580 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 IGHV4-31P0DP07 118 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 ZNF3P17036 446 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 POU1F1P28069 291 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 IL2RGP31785 369 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 ZNF81P51508 661 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 ARHGDIAP52565 204 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 HNRNPA0Q13151 305 aaKnown RBP9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 TMEM236Q5W0B7 351 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 TMEM154Q6P9G4 183 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 ARL9Q6T311 187 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 Q6ZR03 302 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 NAA40Q86UY6 237 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 ATG16L2Q8NAA4 619 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 OR2AJ1Q8NGZ0 328 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 OR5K1Q8NHB7 308 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 SNX33Q8WV41 574 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 RDH5Q92781 318 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 DCLRE1CQ96SD1 692 aaKnown RBP9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 PITX2Q99697 317 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 ATF6BQ99941 703 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 C1QTNF5Q9BXJ0 243 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 SLC25A19Q9HC21 320 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 MSL2Q9HCI7 577 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 DDX28Q9NUL7 540 aaKnown RBP9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 NKIRAS2Q9NYR9 191 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 GPR160Q9UJ42 338 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 AP4S1Q9Y587 144 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 DOCK11Q5JSL3 2073 aa9.35□□□□□ -0.91
SHKBP1-206ENST00000595523 COL6A5A8TX70 2615 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 LRP5LA4QPB2 252 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 J3QW42 95 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 WNT9BO14905 357 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 SPRY3O43610 288 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 MITFO75030 526 aaPredicted RBP9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 ADH4P08319 380 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 ZNF823P16415 610 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 ZNF23P17027 643 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 KITLGP21583 273 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 ACHEP22303 614 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 FMO3P31513 532 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 OTX1P32242 354 aaPredicted RBP9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 RGS6P49758 472 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 ENTPD1P49961 510 aa9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 MRPS11P82912 194 aaKnown RBP9.34□□□□□ -0.91
SHKBP1-206ENST00000595523 HLXQ14774 488 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms