RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 HIST1H2ABP04908 130 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 RPS5P46782 204 aaKnown RBP11.19□□□□□ -0.62
SCAF1-202ENST00000595242 COMPP49747 757 aaPredicted RBP11.19□□□□□ -0.62
SCAF1-202ENST00000595242 ACTA2P62736 377 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 ACTG2P63267 376 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 KRR1Q13601 381 aaKnown RBP11.19□□□□□ -0.62
SCAF1-202ENST00000595242 MFSD13AQ14CX5 517 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 TRAM1Q15629 374 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 CR1LQ2VPA4 569 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 CDONQ4KMG0 1287 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 MESTQ5EB52 335 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 B3GLCTQ6Y288 498 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 HIST3H2AQ7L7L0 130 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 JAZF1Q86VZ6 243 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 KLBQ86Z14 1044 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 C10orf53Q8N6V4 93 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 OR4K17Q8NGC6 315 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 OR5J2Q8NH18 312 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 HIST1H2ACQ93077 130 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 RASD2Q96D21 266 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 MRGPRX4Q96LA9 322 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 KCTD7Q96MP8 289 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 TSPAN32Q96QS1 320 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 NMNAT3Q96T66 252 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 C12orf49Q9H741 205 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 MRPL39Q9NYK5 338 aaKnown RBP11.19□□□□□ -0.62
SCAF1-202ENST00000595242 TAS2R5Q9NYW4 299 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 CRNNQ9UBG3 495 aaPredicted RBP11.19□□□□□ -0.62
SCAF1-202ENST00000595242 GSTK1Q9Y2Q3 226 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 A0A1W2PQL4 384 aaPredicted RBP11.18□□□□□ -0.62
SCAF1-202ENST00000595242 OR2M5A3KFT3 312 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 SHISA9B4DS77 424 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 BLOC1S5-TXNDC5H3BN57 136 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 J3QRK9 145 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 RNF13O43567 381 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 PLPP2O43688 288 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 TGFAP01135 160 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 GYPBP06028 91 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 ZNF12P17014 697 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 IL32P24001 234 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 RPS19P39019 145 aaKnown RBP11.18□□□□□ -0.62
SCAF1-202ENST00000595242 CDKN2AP42771 156 aaKnown RBP11.18□□□□□ -0.62
SCAF1-202ENST00000595242 PPP5CP53041 499 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 FABP5Q01469 135 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 ZNF45Q02386 682 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 ZP4Q12836 540 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 C11orf71Q6IPW1 123 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 LEG1Q6P5S2 330 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 SEZ6L2Q6UXD5 910 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 VASH1Q7L8A9 365 aaPredicted RBP11.18□□□□□ -0.62
SCAF1-202ENST00000595242 SLC35F2Q8IXU6 374 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 FADS6Q8N9I5 356 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 SCAIQ8N9R8 606 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 OR10H4Q8NGA5 316 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 MFSD8Q8NHS3 518 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 ZNF519Q8TB69 540 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 RPS4Y2Q8TD47 263 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 SLC25A46Q96AG3 418 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 MRPL48Q96GC5 212 aaKnown RBP11.18□□□□□ -0.62
SCAF1-202ENST00000595242 WDFY2Q96P53 400 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 MNTQ99583 582 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 POTEKPQ9BYX7 375 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 BARHL1Q9BZE3 327 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 MARCH7Q9H992 704 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 ISG20L2Q9H9L3 353 aaKnown RBP11.18□□□□□ -0.62
SCAF1-202ENST00000595242 CBLN4Q9NTU7 201 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 PPP4R1LQ9P1A2 415 aa11.18□□□□□ -0.62
SCAF1-202ENST00000595242 A0A1B0GVG6 124 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 GABRPO00591 440 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 OGG1O15527 345 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 SC5DO75845 299 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 MRPL3P09001 348 aaKnown RBP11.17□□□□□ -0.62
SCAF1-202ENST00000595242 CSF3P09919 207 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 CELP19835 753 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 EIF1AXP47813 144 aaKnown RBP11.17□□□□□ -0.62
SCAF1-202ENST00000595242 CENPAP49450 140 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 RORCP51449 518 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 SLC16A1P53985 500 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 ACTG1P63261 375 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 PLPPR5Q32ZL2 321 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 PRR31Q5SQ13 230 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 SFRP5Q5T4F7 317 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 DMKNQ6E0U4 476 aaPredicted RBP11.17□□□□□ -0.62
SCAF1-202ENST00000595242 C22orf42Q6IC83 251 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 Q6ZNX1 250 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 CCDC190Q86UF4 302 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 GABRG1Q8N1C3 465 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 OR2M3Q8NG83 312 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 ZNRF4Q8WWF5 429 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 C1GALT1C1Q96EU7 318 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 SMURF1Q9HCE7 757 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 INIPQ9NRY2 104 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 GLRX2Q9NS18 164 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 GRHPRQ9UBQ7 328 aa11.17□□□□□ -0.62
SCAF1-202ENST00000595242 ZNF346Q9UL40 294 aaKnown RBP11.17□□□□□ -0.62
SCAF1-202ENST00000595242 PLPP3O14495 311 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 EIF1AYO14602 144 aaKnown RBP11.16□□□□□ -0.62
SCAF1-202ENST00000595242 ABCD4O14678 606 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 SULT1C4O75897 302 aa11.16□□□□□ -0.62
SCAF1-202ENST00000595242 RGS9O75916 674 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms