RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 BEX2Q9BXY8 128 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 U3KQV3 271 aa15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 FBN1P35555 2871 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-204ENST00000594862 LRP5LA4QPB2 252 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 KIAA1324LA8MWY0 1029 aaPredicted RBP15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 CLDN25C9JDP6 229 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 GNGT2O14610 69 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 TGFAP01135 160 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 IGHV1-46P01743 117 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 CD55P08174 381 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 ZNF823P16415 610 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 KITLGP21583 273 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 COL8A2P25067 703 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 BLVRAP53004 296 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 FLOT2Q14254 428 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 SLC35F1Q5T1Q4 408 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 CD300LDQ6UXZ3 194 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 ADGRG5Q8IZF4 528 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 PROKR2Q8NFJ6 384 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 YIPF5Q969M3 257 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 CLPTM1LQ96KA5 538 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 TSSK6Q9BXA6 273 aa15.11■□□□□ 0.01
SHKBP1-204ENST00000594862 SONP18583 2426 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 ZSCAN5BA6NJL1 495 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 RIIAD1A6NNX1 92 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 SURF4O15260 269 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 DNAJC8O75937 253 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 RAC2P15153 192 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 RASSF2P50749 326 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 CDH15P55291 814 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 PSG7Q13046 419 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 TSTQ16762 297 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 SLC18B1Q6NT16 456 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 USP51Q70EK9 711 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 TEX47Q8TBZ9 253 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 GIPC3Q8TF64 312 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 RAB1CQ92928 201 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 PTP4A1Q93096 173 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 ATF6BQ99941 703 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 PLA2G12AQ9BZM1 189 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 CYB5R1Q9UHQ9 305 aa15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 PURGQ9UJV8 347 aaKnown RBP15.1■□□□□ 0.01
SHKBP1-204ENST00000594862 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 B4DSR2 109 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 SPRY3O43610 288 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 CDC14BO60729 498 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 ZNF3P17036 446 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 TNFRSF1AP19438 455 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 SLC25A1P53007 311 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 DVL1P1P54792 670 aaPredicted RBP15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 TRIP10Q15642 601 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 MEP1BQ16820 701 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 FBXW12Q6X9E4 464 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 PEG10Q86TG7 708 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 OR8D4Q8NGM9 314 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 CLDND2Q8NHS1 167 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 HAVCR1Q96D42 359 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 RAB39BQ96DA2 213 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 PITX2Q99697 317 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 FN3KQ9H479 309 aa15.09■□□□□ 0.01
SHKBP1-204ENST00000594862 E2F6O75461 281 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 GPANK1O95872 356 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 ANPEPP15144 967 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 SELEP16581 610 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 IGFBP5P24593 272 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 THBS2P35442 1172 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 GGT2P36268 569 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 TNFAIP6P98066 277 aaPredicted RBP15.08■□□□□ 0
SHKBP1-204ENST00000594862 CDK5R2Q13319 367 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 SLC27A4Q6P1M0 643 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 GLCCI1Q86VQ1 547 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 SPATA24Q86W54 205 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 SLC37A3Q8NCC5 494 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 CANT1Q8WVQ1 401 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 SLC7A6Q92536 515 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 SPTSSAQ969W0 71 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 CMBLQ96DG6 245 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 ZNF556Q9HAH1 456 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 VNN3Q9NY84 501 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 STARD10Q9Y365 291 aa15.08■□□□□ 0
SHKBP1-204ENST00000594862 ATP5HO75947 161 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 SOX14O95416 240 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 FMO3P31513 532 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 GRK5P34947 590 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 PPP1R8Q12972 351 aaKnown RBP15.07■□□□□ 0
SHKBP1-204ENST00000594862 CCNIQ14094 377 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 KRTAP27-1Q3LI81 207 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 OTPQ5XKR4 325 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 CORO6Q6QEF8 472 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 CFAP77Q6ZQR2 320 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 LINC00346Q8IVM7 164 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 CYB561A3Q8NBI2 242 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 DNAJC9Q8WXX5 260 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 GTF3AQ92664 365 aaKnown RBP15.07■□□□□ 0
SHKBP1-204ENST00000594862 SLC7A6OSQ96CW6 309 aaPredicted RBP15.07■□□□□ 0
SHKBP1-204ENST00000594862 DDOQ99489 341 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 FEVQ99581 238 aa15.07■□□□□ 0
SHKBP1-204ENST00000594862 RBM4Q9BWF3 364 aaKnown RBP15.07■□□□□ 0
SHKBP1-204ENST00000594862 HCAR1Q9BXC0 346 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms