RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 MRPL39Q9NYK5 338 aaKnown RBP9.32□□□□□ -0.92
ZNF558-202ENST00000593891 RPS6KB2Q9UBS0 482 aa9.32□□□□□ -0.92
ZNF558-202ENST00000593891 TMED5Q9Y3A6 229 aa9.32□□□□□ -0.92
ZNF558-202ENST00000593891 CCL27Q9Y4X3 112 aa9.32□□□□□ -0.92
ZNF558-202ENST00000593891 PKHD1P08F94 4074 aa9.32□□□□□ -0.92
ZNF558-202ENST00000593891 A0A1W2PQ09 198 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 C11orf98E9PRG8 122 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 PGRMC1O00264 195 aaKnown RBP9.31□□□□□ -0.92
ZNF558-202ENST00000593891 SEC31AO94979 1220 aaKnown RBP9.31□□□□□ -0.92
ZNF558-202ENST00000593891 OR6A2O95222 327 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 IGHG1P01857 330 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 HLA-DPB1P04440 258 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 PGA4P0DJD7 388 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 PGA3P0DJD8 388 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 IGHV4-30-4P0DP06 118 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 PRG2P13727 222 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 ETS2P15036 469 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 RPS4Y1P22090 263 aaKnown RBP9.31□□□□□ -0.92
ZNF558-202ENST00000593891 AZGP1P25311 298 aaKnown RBP9.31□□□□□ -0.92
ZNF558-202ENST00000593891 PRKAR1BP31321 381 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 RAD23AP54725 363 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 PCBD1P61457 104 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 RPL38P63173 70 aaKnown RBP9.31□□□□□ -0.92
ZNF558-202ENST00000593891 RFTN2Q52LD8 501 aaPredicted RBP9.31□□□□□ -0.92
ZNF558-202ENST00000593891 LRRC10Q5BKY1 277 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 HHATQ5VTY9 493 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 RNLSQ5VYX0 342 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 C10orf53Q8N6V4 93 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 OR8U1Q8NH10 309 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 AENQ8WTP8 325 aaKnown RBP9.31□□□□□ -0.92
ZNF558-202ENST00000593891 AKR1E2Q96JD6 320 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 CCL13Q99616 98 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 EPYCQ99645 322 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 SLC38A1Q9H2H9 487 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 HEXA-AS1Q9H8Q6 139 aa9.31□□□□□ -0.92
ZNF558-202ENST00000593891 A0A1B0GVY2 172 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 GSTA1P08263 222 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 SBK3P0C264 359 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 ADORA3P0DMS8 318 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 GP9P14770 177 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 CDAP32320 146 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 GGT2P36268 569 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 CD200P41217 278 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 SRSF7Q16629 238 aaKnown RBP eCLIP9.3□□□□□ -0.92
ZNF558-202ENST00000593891 HAGHQ16775 308 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 LIN52Q52LA3 116 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 LRRC74BQ6ZQY2 392 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 HOMEZQ8IX15 550 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 MAPKAPK5-AS1Q8N8E1 139 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 ANKFN1Q8N957 763 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 BHLHE23Q8NDY6 225 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 ST6GALNAC6Q969X2 333 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 COQ8BQ96D53 544 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 PBKQ96KB5 322 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 TEX37Q96LM6 180 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 C12orf10Q9HB07 376 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 C19orf73Q9NVV2 129 aa9.3□□□□□ -0.92
ZNF558-202ENST00000593891 SIRT4Q9Y6E7 314 aaPredicted RBP9.3□□□□□ -0.92
ZNF558-202ENST00000593891 SORL1Q92673 2214 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 NUPR2A6NF83 97 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 A8MZ25 164 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 TMEM114B3SHH9 223 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 BGLAPP02818 100 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 POU1F1P28069 291 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 ANP32AP39687 249 aaKnown RBP9.29□□□□□ -0.92
ZNF558-202ENST00000593891 SLC7A5Q01650 507 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 IKZF1Q13422 519 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 MELKQ14680 651 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 UAP1Q16222 522 aaPredicted RBP9.29□□□□□ -0.92
ZNF558-202ENST00000593891 SYPL1Q16563 259 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 HIST3H3Q16695 136 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 LGALS9CQ6DKI2 356 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 C1orf94Q6P1W5 598 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 PLBD1Q6P4A8 553 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 FBXW12Q6X9E4 464 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 CBLL1Q75N03 491 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 ZNF329Q86UD4 541 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 OR5L1Q8NGL2 311 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 OR52P1PQ8NH57 321 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 NABP1Q96AH0 204 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 FOXRED1Q96CU9 486 aaPredicted RBP9.29□□□□□ -0.92
ZNF558-202ENST00000593891 DUS3LQ96G46 650 aaKnown RBP9.29□□□□□ -0.92
ZNF558-202ENST00000593891 PITX2Q99697 317 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 DUSP26Q9BV47 211 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 ARMC7Q9H6L4 198 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 TNFRSF12AQ9NP84 129 aa9.29□□□□□ -0.92
ZNF558-202ENST00000593891 IGHV3OR15-7A0A075B7D8 119 aa9.28□□□□□ -0.92
ZNF558-202ENST00000593891 A0A1B0GWJ7 208 aa9.28□□□□□ -0.92
ZNF558-202ENST00000593891 CXorf65A6NEN9 183 aa9.28□□□□□ -0.92
ZNF558-202ENST00000593891 H3BQF6 201 aa9.28□□□□□ -0.92
ZNF558-202ENST00000593891 EIF3HO15372 352 aaKnown RBP eCLIP9.28□□□□□ -0.92
ZNF558-202ENST00000593891 SNRPAP09012 282 aaKnown RBP9.28□□□□□ -0.92
ZNF558-202ENST00000593891 DUX4L4P0CJ87 422 aa9.28□□□□□ -0.92
ZNF558-202ENST00000593891 SPNP16150 400 aa9.28□□□□□ -0.92
ZNF558-202ENST00000593891 MICBQ29980 383 aa9.28□□□□□ -0.92
ZNF558-202ENST00000593891 ABCA11PQ4W5N1 156 aa9.28□□□□□ -0.92
ZNF558-202ENST00000593891 CEP85LQ5SZL2 805 aa9.28□□□□□ -0.92
ZNF558-202ENST00000593891 FAM27BQ5VT28 67 aa9.28□□□□□ -0.92
ZNF558-202ENST00000593891 ZNF429Q86V71 674 aa9.28□□□□□ -0.92
ZNF558-202ENST00000593891 SGPP2Q8IWX5 399 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms