RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 ENPP4Q9Y6X5 453 aa20.09■□□□□ 0.81
LSM4-202ENST00000593564 PRR31Q5SQ13 230 aa20.08■□□□□ 0.81
LSM4-202ENST00000593564 SHISA2Q6UWI4 295 aa20.08■□□□□ 0.81
LSM4-202ENST00000593564 TSEN54Q7Z6J9 526 aaKnown RBP20.08■□□□□ 0.81
LSM4-202ENST00000593564 ADCK1Q86TW2 530 aa20.08■□□□□ 0.81
LSM4-202ENST00000593564 ATG16L2Q8NAA4 619 aa20.08■□□□□ 0.81
LSM4-202ENST00000593564 FAM46AQ96IP4 442 aaKnown RBP20.08■□□□□ 0.81
LSM4-202ENST00000593564 C1orf147Q96MC9 270 aaPredicted RBP20.08■□□□□ 0.81
LSM4-202ENST00000593564 RERGLQ9H628 205 aa20.08■□□□□ 0.81
LSM4-202ENST00000593564 A0A1W2PRQ8 180 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 NME4O00746 187 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 RER1O15258 196 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 DBHP09172 617 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 WNT2P09544 360 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 SLC7A2P52569 658 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 PAX8Q06710 450 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 DGCR6Q14129 220 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 HLXQ14774 488 aaPredicted RBP20.07■□□□□ 0.8
LSM4-202ENST00000593564 KCNMB1Q16558 191 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 OR5AS1Q8N127 324 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 BCL6BQ8N143 479 aaPredicted RBP20.07■□□□□ 0.8
LSM4-202ENST00000593564 OR8G5Q8NG78 346 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 OR5L1Q8NGL2 311 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 OR13G1Q8NGZ3 307 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 MEGF10Q96KG7 1140 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 ZNF48Q96MX3 618 aaPredicted RBP20.07■□□□□ 0.8
LSM4-202ENST00000593564 DUX5Q96PT3 197 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 HOPXQ9BPY8 73 aaPredicted RBP20.07■□□□□ 0.8
LSM4-202ENST00000593564 IL20RAQ9UHF4 553 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 TRRAPQ9Y4A5 3859 aa20.07■□□□□ 0.8
LSM4-202ENST00000593564 IMPA2O14732 288 aa20.06■□□□□ 0.8
LSM4-202ENST00000593564 TMPRSS2O15393 492 aa20.06■□□□□ 0.8
LSM4-202ENST00000593564 GSK3BP49841 420 aa20.06■□□□□ 0.8
LSM4-202ENST00000593564 PAX2Q02962 417 aa20.06■□□□□ 0.8
LSM4-202ENST00000593564 BAMBIQ13145 260 aa20.06■□□□□ 0.8
LSM4-202ENST00000593564 OR2T2Q6IF00 324 aa20.06■□□□□ 0.8
LSM4-202ENST00000593564 C8orf82Q6P1X6 216 aaPredicted RBP20.06■□□□□ 0.8
LSM4-202ENST00000593564 OR10AD1Q8NGE0 317 aa20.06■□□□□ 0.8
LSM4-202ENST00000593564 APOBEC3DQ96AK3 386 aaPredicted RBP20.06■□□□□ 0.8
LSM4-202ENST00000593564 C1QTNF5Q9BXJ0 243 aa20.06■□□□□ 0.8
LSM4-202ENST00000593564 NUAK2Q9H093 628 aa20.06■□□□□ 0.8
LSM4-202ENST00000593564 PTTG3PQ9NZH4 202 aa20.06■□□□□ 0.8
LSM4-202ENST00000593564 SOCS2O14508 198 aa20.05■□□□□ 0.8
LSM4-202ENST00000593564 TXNDC12O95881 172 aa20.05■□□□□ 0.8
LSM4-202ENST00000593564 H1F0P07305 194 aaKnown RBP20.05■□□□□ 0.8
LSM4-202ENST00000593564 PPIAL4GP0DN37 164 aa20.05■□□□□ 0.8
LSM4-202ENST00000593564 CD80P33681 288 aa20.05■□□□□ 0.8
LSM4-202ENST00000593564 OMPP47874 163 aa20.05■□□□□ 0.8
LSM4-202ENST00000593564 SRP9P49458 86 aaKnown RBP20.05■□□□□ 0.8
LSM4-202ENST00000593564 PGM2L1Q6PCE3 622 aa20.05■□□□□ 0.8
LSM4-202ENST00000593564 PTCHD4Q6ZW05 846 aa20.05■□□□□ 0.8
LSM4-202ENST00000593564 ZNF420Q8TAQ5 688 aaPredicted RBP20.05■□□□□ 0.8
LSM4-202ENST00000593564 RSRC1Q96IZ7 334 aaKnown RBP20.05■□□□□ 0.8
LSM4-202ENST00000593564 ZNF582Q96NG8 517 aaPredicted RBP20.05■□□□□ 0.8
LSM4-202ENST00000593564 COQ7Q99807 217 aa20.05■□□□□ 0.8
LSM4-202ENST00000593564 SSBP3Q9BWW4 388 aaPredicted RBP20.05■□□□□ 0.8
LSM4-202ENST00000593564 ZNF696Q9H7X3 374 aa20.05■□□□□ 0.8
LSM4-202ENST00000593564 TMEM165Q9HC07 324 aa20.05■□□□□ 0.8
LSM4-202ENST00000593564 POLR1DQ9Y2S0 133 aa20.05■□□□□ 0.8
LSM4-202ENST00000593564 IER3IP1Q9Y5U9 82 aa20.05■□□□□ 0.8
LSM4-202ENST00000593564 CLDN34H7C241 214 aa20.04■□□□□ 0.8
LSM4-202ENST00000593564 RNASE1P07998 156 aaKnown RBP20.04■□□□□ 0.8
LSM4-202ENST00000593564 COX4I1P13073 169 aa20.04■□□□□ 0.8
LSM4-202ENST00000593564 FXYD6P3P58550 94 aa20.04■□□□□ 0.8
LSM4-202ENST00000593564 HIST1H3AP68431 136 aa20.04■□□□□ 0.8
LSM4-202ENST00000593564 HIST2H3PS2Q5TEC6 136 aa20.04■□□□□ 0.8
LSM4-202ENST00000593564 DPY19L2P2Q6ZN68 376 aa20.04■□□□□ 0.8
LSM4-202ENST00000593564 C9orf139Q6ZV77 190 aa20.04■□□□□ 0.8
LSM4-202ENST00000593564 HIST2H3AQ71DI3 136 aa20.04■□□□□ 0.8
LSM4-202ENST00000593564 GJC3Q8NFK1 279 aa20.04■□□□□ 0.8
LSM4-202ENST00000593564 OR52E2Q8NGJ4 325 aa20.04■□□□□ 0.8
LSM4-202ENST00000593564 FAM162AQ96A26 154 aa20.04■□□□□ 0.8
LSM4-202ENST00000593564 SLC30A2Q9BRI3 323 aa20.04■□□□□ 0.8
LSM4-202ENST00000593564 MS4A7Q9GZW8 240 aaPredicted RBP20.04■□□□□ 0.8
LSM4-202ENST00000593564 HDHD2Q9H0R4 259 aa20.04■□□□□ 0.8
LSM4-202ENST00000593564 FSTL3O95633 263 aa20.03■□□□□ 0.8
LSM4-202ENST00000593564 CYB5R3P00387 301 aaPredicted RBP20.03■□□□□ 0.8
LSM4-202ENST00000593564 RPS2P15880 293 aaKnown RBP20.03■□□□□ 0.8
LSM4-202ENST00000593564 CRABP1P29762 137 aa20.03■□□□□ 0.8
LSM4-202ENST00000593564 CDKN2AP42771 156 aaKnown RBP20.03■□□□□ 0.8
LSM4-202ENST00000593564 RPS6KA3P51812 740 aa20.03■□□□□ 0.8
LSM4-202ENST00000593564 ZNF181Q2M3W8 571 aa20.03■□□□□ 0.8
LSM4-202ENST00000593564 FGD3Q5JSP0 725 aa20.03■□□□□ 0.8
LSM4-202ENST00000593564 BTNL3Q6UXE8 466 aa20.03■□□□□ 0.8
LSM4-202ENST00000593564 LRRN1Q6UXK5 716 aa20.03■□□□□ 0.8
LSM4-202ENST00000593564 HACD2Q6Y1H2 254 aa20.03■□□□□ 0.8
LSM4-202ENST00000593564 KLBQ86Z14 1044 aa20.03■□□□□ 0.8
LSM4-202ENST00000593564 SLC25A28Q96A46 364 aa20.03■□□□□ 0.8
LSM4-202ENST00000593564 DACT3Q96B18 629 aaPredicted RBP20.03■□□□□ 0.8
LSM4-202ENST00000593564 NDUFAF4Q9P032 175 aa20.03■□□□□ 0.8
LSM4-202ENST00000593564 MIOXQ9UGB7 285 aa20.03■□□□□ 0.8
LSM4-202ENST00000593564 FAM32AQ9Y421 112 aaKnown RBP20.03■□□□□ 0.8
LSM4-202ENST00000593564 LHFPL6Q9Y693 200 aa20.03■□□□□ 0.8
LSM4-202ENST00000593564 IGHV2-70DA0A0C4DH43 119 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 IQCF6A8MYZ5 107 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 H0YL77 283 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 NDUFAB1O14561 156 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 MLNRO43193 412 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 ZNF205O95201 554 aa20.02■□□□□ 0.8
LSM4-202ENST00000593564 IGHV4-38-2P0DP08 117 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms