RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 CENPMQ9NSP4 180 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 MALT1Q9UDY8 824 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 LRP12Q9Y561 859 aa11.81□□□□□ -0.52
VMP1-217ENST00000593168 NCOA6Q14686 2063 aaPredicted RBP11.81□□□□□ -0.52
VMP1-217ENST00000593168 DOCK7Q96N67 2140 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 LOC100506127A0A0U1RQW1 187 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 ZNF878C9JN71 531 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 PRRG2O14669 202 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 RPP14O95059 124 aaKnown RBP11.8□□□□□ -0.52
VMP1-217ENST00000593168 MPGP29372 298 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 KIR2DL2P43627 348 aaPredicted RBP11.8□□□□□ -0.52
VMP1-217ENST00000593168 GDI2P50395 445 aaKnown RBP11.8□□□□□ -0.52
VMP1-217ENST00000593168 CCR9P51686 369 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 SH3BGRP55822 239 aaPredicted RBP11.8□□□□□ -0.52
VMP1-217ENST00000593168 NANOS3P60323 173 aaKnown RBP11.8□□□□□ -0.52
VMP1-217ENST00000593168 VBP1P61758 197 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 NCS1P62166 190 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 LSM3P62310 102 aaKnown RBP11.8□□□□□ -0.52
VMP1-217ENST00000593168 ARF1P84077 181 aaKnown RBP11.8□□□□□ -0.52
VMP1-217ENST00000593168 FABP5Q01469 135 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 SLC3A1Q07837 685 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 SCRN3Q0VDG4 424 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 SPCS2Q15005 226 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 GFRALQ6UXV0 394 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 TFAP2EQ6VUC0 442 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 ZNF813Q6ZN06 617 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 CFAP77Q6ZQR2 320 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 SEM1Q6ZVN7 128 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 CD163Q86VB7 1156 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.8□□□□□ -0.52
VMP1-217ENST00000593168 UBE2J2Q8N2K1 259 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 OR10S1Q8NGN2 331 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 OR2G2Q8NGZ5 317 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 ABHD4Q8TB40 342 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 HTRA1Q92743 480 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 GHSRQ92847 366 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 TMEM203Q969S6 136 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 FBXO17Q96EF6 278 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 CENPOQ9BU64 300 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 KCNN2Q9H2S1 579 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 TP63Q9H3D4 680 aaPredicted RBP11.8□□□□□ -0.52
VMP1-217ENST00000593168 C12orf49Q9H741 205 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 EXOSC4Q9NPD3 245 aaKnown RBP11.8□□□□□ -0.52
VMP1-217ENST00000593168 PNRC2Q9NPJ4 139 aaKnown RBP11.8□□□□□ -0.52
VMP1-217ENST00000593168 PLSCR4Q9NRQ2 329 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 PTTG2Q9NZH5 202 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 FRRS1LQ9P0K9 344 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 PRSS50Q9UI38 385 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 ZNF835Q9Y2P0 537 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 GSTK1Q9Y2Q3 226 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 FAM215AQ9Y5M1 114 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 R4GMQ9 66 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 ZFHX3Q15911 3703 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 DCHS2Q6V1P9 2916 aa11.8□□□□□ -0.52
VMP1-217ENST00000593168 A0A1W2PPW3 197 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 RER1O15258 196 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 SRSF10O75494 262 aaKnown RBP11.79□□□□□ -0.52
VMP1-217ENST00000593168 WNT11O96014 354 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 SERPINA3P01011 423 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 B4GALT1P15291 398 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 CTSSP25774 331 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 MMP16P51512 607 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 PCBD1P61457 104 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 RBPJQ06330 500 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 FAPQ12884 760 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 OR7E24Q6IFN5 339 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 USP43Q70EL4 1123 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 SPATC1Q76KD6 591 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 SKA3Q8IX90 412 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 GCNT2Q8N0V5 402 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 LRRC18Q8N456 261 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 KBTBD8Q8NFY9 601 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 C4orf45Q96LM5 186 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 TMED9Q9BVK6 235 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 DDX28Q9NUL7 540 aaKnown RBP11.79□□□□□ -0.52
VMP1-217ENST00000593168 TXNL4BQ9NX01 149 aaKnown RBP11.79□□□□□ -0.52
VMP1-217ENST00000593168 ZNF281Q9Y2X9 895 aa11.79□□□□□ -0.52
VMP1-217ENST00000593168 ARHGAP21Q5T5U3 1957 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 HIVEP1P15822 2718 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 ARPC4-TTLL3A0A0A6YYG9 625 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 A0A1B0GUH1 482 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 TMEM212A6NML5 194 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 OR4C45A6NMZ5 311 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 GABRPO00591 440 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 TNFSF13O75888 250 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 RGS9O75916 674 aaPredicted RBP11.78□□□□□ -0.52
VMP1-217ENST00000593168 TOXO94900 526 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 ZFPL1O95159 310 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 IL2RAP01589 272 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 PCSK6P29122 969 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 CEACAM8P31997 349 aaPredicted RBP11.78□□□□□ -0.52
VMP1-217ENST00000593168 GRB2P62993 217 aaKnown RBP11.78□□□□□ -0.52
VMP1-217ENST00000593168 TUBA1BP68363 451 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 ECH1Q13011 328 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 TAF13Q15543 124 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 ZNF829Q3KNS6 432 aaPredicted RBP11.78□□□□□ -0.52
VMP1-217ENST00000593168 CCDC92Q53HC0 331 aaPredicted RBP11.78□□□□□ -0.52
VMP1-217ENST00000593168 YIF1BQ5BJH7 314 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 ELFN2Q5R3F8 820 aa11.78□□□□□ -0.52
VMP1-217ENST00000593168 KLHL24Q6TFL4 600 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms