RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 OR14K1Q8NGZ2 314 aa8.81□□□□□ -1
LIG3-216ENST00000593099 UBE2FQ969M7 185 aa8.81□□□□□ -1
LIG3-216ENST00000593099 CTHRC1Q96CG8 243 aa8.81□□□□□ -1
LIG3-216ENST00000593099 ZNF639Q9UID6 485 aa8.81□□□□□ -1
LIG3-216ENST00000593099 KLK13Q9UKR3 277 aa8.81□□□□□ -1
LIG3-216ENST00000593099 IGLV3-12A0A075B6K2 115 aa8.81□□□□□ -1
LIG3-216ENST00000593099 TRAV18A0A075B6X5 111 aa8.81□□□□□ -1
LIG3-216ENST00000593099 WDR1O75083 606 aa8.81□□□□□ -1
LIG3-216ENST00000593099 RAB5CP51148 216 aa8.81□□□□□ -1
LIG3-216ENST00000593099 NCS1P62166 190 aa8.81□□□□□ -1
LIG3-216ENST00000593099 C4orf46Q504U0 113 aa8.81□□□□□ -1
LIG3-216ENST00000593099 ELFN2Q5R3F8 820 aa8.81□□□□□ -1
LIG3-216ENST00000593099 TMEM179BQ7Z7N9 219 aa8.81□□□□□ -1
LIG3-216ENST00000593099 SORCS2Q96PQ0 1159 aa8.81□□□□□ -1
LIG3-216ENST00000593099 NOTCH4Q99466 2003 aa8.81□□□□□ -1
LIG3-216ENST00000593099 OR10A4Q9H209 315 aa8.81□□□□□ -1
LIG3-216ENST00000593099 FLRT3Q9NZU0 649 aa8.81□□□□□ -1
LIG3-216ENST00000593099 MYEF2Q9P2K5 600 aaKnown RBP8.81□□□□□ -1
LIG3-216ENST00000593099 GDF2Q9UK05 429 aaPredicted RBP8.81□□□□□ -1
LIG3-216ENST00000593099 TSC2P49815 1807 aa8.81□□□□□ -1
LIG3-216ENST00000593099 FUOMA2VDF0 154 aa8.81□□□□□ -1
LIG3-216ENST00000593099 ACOD1A6NK06 481 aa8.81□□□□□ -1
LIG3-216ENST00000593099 IFNA17P01571 189 aa8.81□□□□□ -1
LIG3-216ENST00000593099 IGKV1D-16P01601 117 aa8.81□□□□□ -1
LIG3-216ENST00000593099 GTF2F2P13984 249 aa8.81□□□□□ -1
LIG3-216ENST00000593099 ACHEP22303 614 aa8.81□□□□□ -1
LIG3-216ENST00000593099 GABRR1P24046 479 aa8.81□□□□□ -1
LIG3-216ENST00000593099 HTR2AP28223 471 aa8.81□□□□□ -1
LIG3-216ENST00000593099 FABP6P51161 128 aa8.81□□□□□ -1
LIG3-216ENST00000593099 OR8G1Q15617 311 aa8.81□□□□□ -1
LIG3-216ENST00000593099 ARTNQ5T4W7 220 aa8.81□□□□□ -1
LIG3-216ENST00000593099 TMEM108Q6UXF1 575 aa8.81□□□□□ -1
LIG3-216ENST00000593099 ZNF679Q8IYX0 411 aa8.81□□□□□ -1
LIG3-216ENST00000593099 OR5AS1Q8N127 324 aa8.81□□□□□ -1
LIG3-216ENST00000593099 DNAAF1Q8NEP3 725 aa8.81□□□□□ -1
LIG3-216ENST00000593099 FLVCR1-AS1Q8TAF5 88 aa8.81□□□□□ -1
LIG3-216ENST00000593099 RNF170Q96K19 258 aa8.81□□□□□ -1
LIG3-216ENST00000593099 RTL8AQ9BWD3 113 aa8.81□□□□□ -1
LIG3-216ENST00000593099 SIAEQ9HAT2 523 aa8.81□□□□□ -1
LIG3-216ENST00000593099 ERVK13-1Q9NX77 482 aa8.81□□□□□ -1
LIG3-216ENST00000593099 HMX3A6NHT5 357 aa8.8□□□□□ -1
LIG3-216ENST00000593099 B4DXG7 233 aa8.8□□□□□ -1
LIG3-216ENST00000593099 J3QRK9 145 aa8.8□□□□□ -1
LIG3-216ENST00000593099 IGKV3-11P04433 115 aa8.8□□□□□ -1
LIG3-216ENST00000593099 GUSBP08236 651 aa8.8□□□□□ -1
LIG3-216ENST00000593099 ZNF83P51522 516 aa8.8□□□□□ -1
LIG3-216ENST00000593099 ARHGDIBP52566 201 aa8.8□□□□□ -1
LIG3-216ENST00000593099 RPP30P78346 268 aaKnown RBP8.8□□□□□ -1
LIG3-216ENST00000593099 BTN1A1Q13410 526 aa8.8□□□□□ -1
LIG3-216ENST00000593099 PLA2G2CQ5R387 149 aa8.8□□□□□ -1
LIG3-216ENST00000593099 C1orf185Q5T7R7 199 aa8.8□□□□□ -1
LIG3-216ENST00000593099 PXDC1Q5TGL8 231 aa8.8□□□□□ -1
LIG3-216ENST00000593099 DESI1Q6ICB0 168 aa8.8□□□□□ -1
LIG3-216ENST00000593099 RGS7BPQ6MZT1 257 aaPredicted RBP8.8□□□□□ -1
LIG3-216ENST00000593099 COX15Q7KZN9 410 aa8.8□□□□□ -1
LIG3-216ENST00000593099 HAS2Q92819 552 aa8.8□□□□□ -1
LIG3-216ENST00000593099 FGGYQ96C11 551 aa8.8□□□□□ -1
LIG3-216ENST00000593099 NELFAQ9H3P2 528 aa8.8□□□□□ -1
LIG3-216ENST00000593099 PIGLQ9Y2B2 252 aa8.8□□□□□ -1
LIG3-216ENST00000593099 NYNRINQ9P2P1 1898 aaKnown RBP8.8□□□□□ -1
LIG3-216ENST00000593099 M0R233 179 aa8.8□□□□□ -1
LIG3-216ENST00000593099 LYZL6O75951 148 aa8.8□□□□□ -1
LIG3-216ENST00000593099 NXPH2O95156 264 aa8.8□□□□□ -1
LIG3-216ENST00000593099 PMS2P2O95744 297 aa8.8□□□□□ -1
LIG3-216ENST00000593099 IFNA21P01568 189 aa8.8□□□□□ -1
LIG3-216ENST00000593099 SERPINA2P20848 420 aa8.8□□□□□ -1
LIG3-216ENST00000593099 HMGA2P52926 109 aa8.8□□□□□ -1
LIG3-216ENST00000593099 OR8B8Q15620 311 aa8.8□□□□□ -1
LIG3-216ENST00000593099 ZNF658BQ4V348 819 aaPredicted RBP8.8□□□□□ -1
LIG3-216ENST00000593099 C1QL3Q5VWW1 255 aa8.8□□□□□ -1
LIG3-216ENST00000593099 ANKRD16Q6P6B7 361 aa8.8□□□□□ -1
LIG3-216ENST00000593099 UGT2A3Q6UWM9 527 aa8.8□□□□□ -1
LIG3-216ENST00000593099 WDR88Q6ZMY6 472 aa8.8□□□□□ -1
LIG3-216ENST00000593099 SSX7Q7RTT5 188 aa8.8□□□□□ -1
LIG3-216ENST00000593099 SPACA3Q8IXA5 215 aa8.8□□□□□ -1
LIG3-216ENST00000593099 FBXL14Q8N1E6 418 aa8.8□□□□□ -1
LIG3-216ENST00000593099 PSMF1Q92530 271 aa8.8□□□□□ -1
LIG3-216ENST00000593099 PHYHIPQ92561 330 aa8.8□□□□□ -1
LIG3-216ENST00000593099 GCDHQ92947 438 aaPredicted RBP8.8□□□□□ -1
LIG3-216ENST00000593099 MOGAT1Q96PD6 335 aa8.8□□□□□ -1
LIG3-216ENST00000593099 OR51E2Q9H255 320 aa8.8□□□□□ -1
LIG3-216ENST00000593099 MGAT4AQ9UM21 535 aa8.8□□□□□ -1
LIG3-216ENST00000593099 LOC100509620A0A075B734 347 aa8.8□□□□□ -1
LIG3-216ENST00000593099 IGKV3D-11A0A0A0MRZ8 115 aa8.8□□□□□ -1
LIG3-216ENST00000593099 ZC3H12DA2A288 527 aaKnown RBP8.8□□□□□ -1
LIG3-216ENST00000593099 AHRRA9YTQ3 701 aa8.8□□□□□ -1
LIG3-216ENST00000593099 ADAM10O14672 748 aa8.8□□□□□ -1
LIG3-216ENST00000593099 GRPP07492 148 aa8.8□□□□□ -1
LIG3-216ENST00000593099 P2RY14Q15391 338 aa8.8□□□□□ -1
LIG3-216ENST00000593099 PLPPR5Q32ZL2 321 aa8.8□□□□□ -1
LIG3-216ENST00000593099 YIF1BQ5BJH7 314 aa8.8□□□□□ -1
LIG3-216ENST00000593099 ZNF517Q6ZMY9 492 aaPredicted RBP8.8□□□□□ -1
LIG3-216ENST00000593099 SERPINA12Q8IW75 414 aa8.8□□□□□ -1
LIG3-216ENST00000593099 OR6X1Q8NH79 312 aa8.8□□□□□ -1
LIG3-216ENST00000593099 WACQ9BTA9 647 aa8.8□□□□□ -1
LIG3-216ENST00000593099 NKX6-3A6NJ46 265 aa8.8□□□□□ -1
LIG3-216ENST00000593099 OR7C1O76099 320 aaPredicted RBP8.8□□□□□ -1
LIG3-216ENST00000593099 RECKO95980 971 aa8.8□□□□□ -1
LIG3-216ENST00000593099 GABRA5P31644 462 aa8.8□□□□□ -1
LIG3-216ENST00000593099 CDAP32320 146 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms