RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 SGMS2Q8NHU3 365 aa17.21■□□□□ 0.35
TRIM47-207ENST00000593089 ZNF420Q8TAQ5 688 aaPredicted RBP17.21■□□□□ 0.35
TRIM47-207ENST00000593089 DUX5Q96PT3 197 aa17.21■□□□□ 0.35
TRIM47-207ENST00000593089 MRI1Q9BV20 369 aa17.21■□□□□ 0.35
TRIM47-207ENST00000593089 GCM1Q9NP62 436 aa17.21■□□□□ 0.35
TRIM47-207ENST00000593089 ZNF69Q9UC07 566 aa17.21■□□□□ 0.35
TRIM47-207ENST00000593089 AURKCQ9UQB9 309 aa17.21■□□□□ 0.35
TRIM47-207ENST00000593089 POLR3KQ9Y2Y1 108 aaPredicted RBP17.21■□□□□ 0.35
TRIM47-207ENST00000593089 FAM32AQ9Y421 112 aaKnown RBP17.21■□□□□ 0.35
TRIM47-207ENST00000593089 A0A1W2PRQ8 180 aa17.2■□□□□ 0.34
TRIM47-207ENST00000593089 A8MXK9 166 aa17.2■□□□□ 0.34
TRIM47-207ENST00000593089 F5H0A9 414 aaPredicted RBP17.2■□□□□ 0.34
TRIM47-207ENST00000593089 TMEM178BH3BS89 294 aa17.2■□□□□ 0.34
TRIM47-207ENST00000593089 MDH2P40926 338 aaKnown RBP17.2■□□□□ 0.34
TRIM47-207ENST00000593089 OMPP47874 163 aa17.2■□□□□ 0.34
TRIM47-207ENST00000593089 RGS6P49758 472 aa17.2■□□□□ 0.34
TRIM47-207ENST00000593089 FXYD6P3P58550 94 aa17.2■□□□□ 0.34
TRIM47-207ENST00000593089 DGCR6Q14129 220 aa17.2■□□□□ 0.34
TRIM47-207ENST00000593089 MEP1BQ16820 701 aa17.2■□□□□ 0.34
TRIM47-207ENST00000593089 KLF17Q5JT82 389 aaPredicted RBP17.2■□□□□ 0.34
TRIM47-207ENST00000593089 ADCK1Q86TW2 530 aa17.2■□□□□ 0.34
TRIM47-207ENST00000593089 BCL6BQ8N143 479 aaPredicted RBP17.2■□□□□ 0.34
TRIM47-207ENST00000593089 TSSK2Q96PF2 358 aa17.2■□□□□ 0.34
TRIM47-207ENST00000593089 GPX7Q96SL4 187 aaPredicted RBP17.2■□□□□ 0.34
TRIM47-207ENST00000593089 C1QTNF5Q9BXJ0 243 aa17.2■□□□□ 0.34
TRIM47-207ENST00000593089 NDUFAF4Q9P032 175 aa17.2■□□□□ 0.34
TRIM47-207ENST00000593089 OR5V1Q9UGF6 321 aa17.2■□□□□ 0.34
TRIM47-207ENST00000593089 RPS6KA6Q9UK32 745 aa17.2■□□□□ 0.34
TRIM47-207ENST00000593089 TRBV4-1A0A0J9YWV2 114 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 UNC119BA6NIH7 251 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 CEACAM18A8MTB9 384 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 CCDC22O60826 627 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 DIRAS1O95057 198 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 ZNF205O95201 554 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 CDKN2AP42771 156 aaKnown RBP17.19■□□□□ 0.34
TRIM47-207ENST00000593089 RPS6KA3P51812 740 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 SEC23BQ15437 767 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 FBXW12Q6X9E4 464 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 HACD2Q6Y1H2 254 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 DPY19L2P2Q6ZN68 376 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 MUC20Q8N307 709 aaPredicted RBP17.19■□□□□ 0.34
TRIM47-207ENST00000593089 OR8G5Q8NG78 346 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 OR5L1Q8NGL2 311 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 CCDC134Q9H6E4 229 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 ATPIF1Q9UII2 106 aa17.19■□□□□ 0.34
TRIM47-207ENST00000593089 IGHV3-64DA0A0J9YX35 117 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 DNAJC9-AS1A6NH13 148 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 H0YL77 283 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 J3QW42 95 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 NDUFAB1O14561 156 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 PPP1R3DO95685 299 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 CYB5R3P00387 301 aaPredicted RBP17.18■□□□□ 0.34
TRIM47-207ENST00000593089 RHCEP18577 417 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 KCNMB1Q16558 191 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 SLC27A4Q6P1M0 643 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 CORO6Q6QEF8 472 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 DOK3Q7L591 496 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 BHLHE23Q8NDY6 225 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 GJC3Q8NFK1 279 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 OR13G1Q8NGZ3 307 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 OR52J3Q8NH60 311 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 APOBEC3DQ96AK3 386 aaPredicted RBP17.18■□□□□ 0.34
TRIM47-207ENST00000593089 MEGF10Q96KG7 1140 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 ZNF582Q96NG8 517 aaPredicted RBP17.18■□□□□ 0.34
TRIM47-207ENST00000593089 GPA33Q99795 319 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 WDR76Q9H967 626 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 KRCC1Q9NPI7 259 aaPredicted RBP17.18■□□□□ 0.34
TRIM47-207ENST00000593089 LRCH1Q9Y2L9 728 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 PCDHGB1Q9Y5G3 927 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 LHFPL6Q9Y693 200 aa17.18■□□□□ 0.34
TRIM47-207ENST00000593089 DCTN6O00399 190 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 TXNDC12O95881 172 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 WNT2P09544 360 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 HKR1P10072 659 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 RPS2P15880 293 aaKnown RBP17.17■□□□□ 0.34
TRIM47-207ENST00000593089 PRTN3P24158 256 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 CRABP1P29762 137 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 SRP9P49458 86 aaKnown RBP17.17■□□□□ 0.34
TRIM47-207ENST00000593089 PSME3P61289 254 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 HIST1H3AP68431 136 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 DBPQ10586 325 aaPredicted RBP17.17■□□□□ 0.34
TRIM47-207ENST00000593089 HIST2H3PS2Q5TEC6 136 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 GLYATQ6IB77 296 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 DNM1P34Q6PK57 102 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 SMARCD3Q6STE5 483 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 HIST2H3AQ71DI3 136 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 FAM86B1Q8N7N1 296 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 ERMAPQ96PL5 475 aaPredicted RBP17.17■□□□□ 0.34
TRIM47-207ENST00000593089 COQ7Q99807 217 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 SSBP3Q9BWW4 388 aaPredicted RBP17.17■□□□□ 0.34
TRIM47-207ENST00000593089 HDHD2Q9H0R4 259 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 SRA1Q9HD15 236 aaKnown RBP17.17■□□□□ 0.34
TRIM47-207ENST00000593089 ABCD2Q9UBJ2 740 aa17.17■□□□□ 0.34
TRIM47-207ENST00000593089 IGHV3OR16-10A0A075B7F0 116 aa17.16■□□□□ 0.34
TRIM47-207ENST00000593089 F5H5P2 479 aa17.16■□□□□ 0.34
TRIM47-207ENST00000593089 IFNL4K9M1U5 179 aa17.16■□□□□ 0.34
TRIM47-207ENST00000593089 PRSS12P56730 875 aa17.16■□□□□ 0.34
TRIM47-207ENST00000593089 FOXL1Q12952 345 aa17.16■□□□□ 0.34
TRIM47-207ENST00000593089 BAMBIQ13145 260 aa17.16■□□□□ 0.34
TRIM47-207ENST00000593089 KRT72Q14CN4 511 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms