RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 NUP50Q9UKX7 468 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 AURKCQ9UQB9 309 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 LRCH1Q9Y2L9 728 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 COA3Q9Y2R0 106 aaPredicted RBP15.89■□□□□ 0.13
CCDC43-205ENST00000592333 DYSFO75923 2080 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 F5H0A9 414 aaPredicted RBP15.88■□□□□ 0.13
CCDC43-205ENST00000592333 TMEM178BH3BS89 294 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 ARPC3O15145 178 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 GMNNO75496 209 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 SF3A3Q12874 501 aaKnown RBP eCLIP15.88■□□□□ 0.13
CCDC43-205ENST00000592333 ZNF154Q13106 437 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 SMARCD3Q6STE5 483 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 ZDHHC22Q8N966 263 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 OR8G5Q8NG78 346 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 ITLN1Q8WWA0 313 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 RSRC1Q96IZ7 334 aaKnown RBP15.88■□□□□ 0.13
CCDC43-205ENST00000592333 C7orf34Q96L11 122 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 OR2V2Q96R30 315 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 MRI1Q9BV20 369 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 POFUT1Q9H488 388 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 GCM1Q9NP62 436 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 SPAG4Q9NPE6 437 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 INSIG2Q9Y5U4 225 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 IER3IP1Q9Y5U9 82 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 AUP1Q9Y679 476 aa15.88■□□□□ 0.13
CCDC43-205ENST00000592333 A0A1B0GWJ7 208 aa15.87■□□□□ 0.13
CCDC43-205ENST00000592333 SELEP16581 610 aa15.87■□□□□ 0.13
CCDC43-205ENST00000592333 PRDX6P30041 224 aa15.87■□□□□ 0.13
CCDC43-205ENST00000592333 MDH1P40925 334 aaKnown RBP15.87■□□□□ 0.13
CCDC43-205ENST00000592333 SRP9P49458 86 aaKnown RBP15.87■□□□□ 0.13
CCDC43-205ENST00000592333 NUDT2P50583 147 aa15.87■□□□□ 0.13
CCDC43-205ENST00000592333 COX10Q12887 443 aa15.87■□□□□ 0.13
CCDC43-205ENST00000592333 KRT72Q14CN4 511 aa15.87■□□□□ 0.13
CCDC43-205ENST00000592333 ZMYND11Q15326 602 aa15.87■□□□□ 0.13
CCDC43-205ENST00000592333 ESCO2Q56NI9 601 aa15.87■□□□□ 0.13
CCDC43-205ENST00000592333 GLYATQ6IB77 296 aa15.87■□□□□ 0.13
CCDC43-205ENST00000592333 ZNF582Q96NG8 517 aaPredicted RBP15.87■□□□□ 0.13
CCDC43-205ENST00000592333 GORASP2Q9H8Y8 452 aa15.87■□□□□ 0.13
CCDC43-205ENST00000592333 MED4Q9NPJ6 270 aa15.87■□□□□ 0.13
CCDC43-205ENST00000592333 UNC119BA6NIH7 251 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 SOCS2O14508 198 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 RER1O15258 196 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 CDKN2AP42771 156 aaKnown RBP15.86■□□□□ 0.13
CCDC43-205ENST00000592333 FXYD6P3P58550 94 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 PSME3P61289 254 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 UBA52P62987 128 aaKnown RBP15.86■□□□□ 0.13
CCDC43-205ENST00000592333 FOXL1Q12952 345 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 ECH1Q13011 328 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 ARMCX4Q5H9R4 360 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 FGD3Q5JSP0 725 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 COLCA1Q6ZS62 124 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 DOK3Q7L591 496 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 CELF2-AS1Q8N7Q2 184 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 ATG16L2Q8NAA4 619 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 ERGIC1Q969X5 290 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 FUZQ9BT04 418 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 DCAF16Q9NXF7 216 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 POLR1DQ9Y2S0 133 aa15.86■□□□□ 0.13
CCDC43-205ENST00000592333 LRRC30A6NM36 301 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 IQCF6A8MYZ5 107 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 TRAPPC2LH3BP13 241 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 SPRY1O43609 319 aaPredicted RBP15.85■□□□□ 0.13
CCDC43-205ENST00000592333 IDH3BO43837 385 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 RGS9O75916 674 aaPredicted RBP15.85■□□□□ 0.13
CCDC43-205ENST00000592333 WNT2P09544 360 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 MMP16P51512 607 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 PAX8Q06710 450 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 RFX4Q33E94 735 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 SLC36A3Q495N2 470 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 C1orf94Q6P1W5 598 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 LRRN1Q6UXK5 716 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 PTCHD4Q6ZW05 846 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 C1orf87Q8N0U7 546 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 SLC7A6Q92536 515 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 SLC30A2Q9BRI3 323 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 RERGLQ9H628 205 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 ESM1Q9NQ30 184 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 MMP26Q9NRE1 261 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 MIOXQ9UGB7 285 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 OR5V1Q9UGF6 321 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 LHFPL6Q9Y693 200 aa15.85■□□□□ 0.13
CCDC43-205ENST00000592333 IGLV1-36A0A0B4J1U3 117 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 TRBV4-1A0A0J9YWV2 114 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 CLDN34H7C241 214 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 HKR1P10072 659 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 NCK1P16333 377 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 PRTN3P24158 256 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 SLC6A6P31641 620 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 IFNGR2P38484 337 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 GATA4P43694 442 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 SEC23BQ15437 767 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 KRTAP27-1Q3LI81 207 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 AWAT1Q58HT5 328 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 C9orf139Q6ZV77 190 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 ZBTB46Q86UZ6 589 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 PLEKHA8Q96JA3 519 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 MEGF10Q96KG7 1140 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 HCAR1Q9BXC0 346 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 C1QTNF5Q9BXJ0 243 aa15.84■□□□□ 0.13
CCDC43-205ENST00000592333 MYLK2Q9H1R3 596 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms