RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ZNF878C9JN71 531 aa13.97□□□□□ -0.17
MBD1-227ENST00000592060 G3V3Y1 287 aa13.97□□□□□ -0.17
MBD1-227ENST00000592060 ARPC1BO15143 372 aaKnown RBP13.97□□□□□ -0.17
MBD1-227ENST00000592060 RBBP9O75884 186 aa13.97□□□□□ -0.17
MBD1-227ENST00000592060 STK17BO94768 372 aa13.97□□□□□ -0.17
MBD1-227ENST00000592060 MECP2P51608 486 aaKnown RBP13.97□□□□□ -0.17
MBD1-227ENST00000592060 ZP1P60852 638 aa13.97□□□□□ -0.17
MBD1-227ENST00000592060 GUCA2AQ02747 115 aa13.97□□□□□ -0.17
MBD1-227ENST00000592060 ZNF468Q5VIY5 522 aaPredicted RBP13.97□□□□□ -0.17
MBD1-227ENST00000592060 GON7Q9BXV9 100 aa13.97□□□□□ -0.17
MBD1-227ENST00000592060 ATG5Q9H1Y0 275 aa13.97□□□□□ -0.17
MBD1-227ENST00000592060 SEC61A2Q9H9S3 476 aa13.97□□□□□ -0.17
MBD1-227ENST00000592060 PNRC2Q9NPJ4 139 aaKnown RBP13.97□□□□□ -0.17
MBD1-227ENST00000592060 HPF1Q9NWY4 346 aa13.97□□□□□ -0.17
MBD1-227ENST00000592060 ZNF222Q9UK12 451 aa13.97□□□□□ -0.17
MBD1-227ENST00000592060 DCDC2BA2VCK2 349 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 OR2M5A3KFT3 312 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 A6NL46 340 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 NDUFB6O95139 128 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 QDPRP09417 244 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 ZNF17P17021 662 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 PCGF3Q3KNV8 242 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 RHOUQ7L0Q8 258 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 C9orf62Q8N4C0 152 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 TMEM156Q8N614 296 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 OR4C16Q8NGL9 310 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 TMEM41AQ96HV5 264 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 MOB1AQ9H8S9 216 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 DKKL1Q9UK85 242 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 POLR1DQ9Y2S0 133 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 LOXL2Q9Y4K0 774 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 NPTNQ9Y639 398 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 MED12Q93074 2177 aa13.96□□□□□ -0.17
MBD1-227ENST00000592060 A0A1B0GTI1 187 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 ZNF726A6NNF4 738 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 AKR7A2O43488 359 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 ICMTO60725 284 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 CSF1P09603 554 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 MPLP40238 635 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 CLDN17P56750 224 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 RPS18P62269 152 aaKnown RBP13.96□□□□□ -0.18
MBD1-227ENST00000592060 SSBP1Q04837 148 aaKnown RBP13.96□□□□□ -0.18
MBD1-227ENST00000592060 CHAF1BQ13112 559 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 DCAF12Q5T6F0 453 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 RAET1LQ5VY80 246 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 ZNF529Q6P280 563 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 ZNF813Q6ZN06 617 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 Q6ZTK2 550 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 JAGN1Q8N5M9 183 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 ZBTB44Q8NCP5 570 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 OR1J2Q8NGS2 313 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 OR2AJ1Q8NGZ0 328 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 GPX8Q8TED1 209 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 FGGYQ96C11 551 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 ADAT3Q96EY9 351 aaPredicted RBP13.96□□□□□ -0.18
MBD1-227ENST00000592060 NOX3Q9HBY0 568 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 TAS2R8Q9NYW2 309 aa13.96□□□□□ -0.18
MBD1-227ENST00000592060 ZNF780AO75290 641 aaPredicted RBP13.95□□□□□ -0.18
MBD1-227ENST00000592060 HSD11B1P28845 292 aa13.95□□□□□ -0.18
MBD1-227ENST00000592060 PRSS3P35030 304 aa13.95□□□□□ -0.18
MBD1-227ENST00000592060 ZNF133P52736 654 aaPredicted RBP13.95□□□□□ -0.18
MBD1-227ENST00000592060 CLDN6P56747 220 aa13.95□□□□□ -0.18
MBD1-227ENST00000592060 Q0VFX4 171 aa13.95□□□□□ -0.18
MBD1-227ENST00000592060 POU4F3Q15319 338 aa13.95□□□□□ -0.18
MBD1-227ENST00000592060 METTL11BQ5VVY1 283 aa13.95□□□□□ -0.18
MBD1-227ENST00000592060 OR4D6Q8NGJ1 314 aa13.95□□□□□ -0.18
MBD1-227ENST00000592060 PTX4Q96A99 478 aa13.95□□□□□ -0.18
MBD1-227ENST00000592060 DACT3Q96B18 629 aaPredicted RBP13.95□□□□□ -0.18
MBD1-227ENST00000592060 RYDENQ9NUL5 291 aaKnown RBP13.95□□□□□ -0.18
MBD1-227ENST00000592060 ASH2LQ9UBL3 628 aa13.95□□□□□ -0.18
MBD1-227ENST00000592060 PCDHGA5Q9Y5G8 931 aa13.95□□□□□ -0.18
MBD1-227ENST00000592060 A0A1B0GVI7 797 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 PMS2P1A4D2B8 440 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 SYT7O43581 403 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 SSNA1O43805 119 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 CD63P08962 238 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 BDKRB2P30411 391 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 FAUP35544 74 aaKnown RBP13.94□□□□□ -0.18
MBD1-227ENST00000592060 RAD52P43351 418 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 GABREP78334 506 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 GLDNQ6ZMI3 551 aaPredicted RBP13.94□□□□□ -0.18
MBD1-227ENST00000592060 FOXL2NBQ6ZUU3 175 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 TIPARPQ7Z3E1 657 aaKnown RBP13.94□□□□□ -0.18
MBD1-227ENST00000592060 LILRB4Q8NHJ6 448 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 RHBDD1Q8TEB9 315 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 CT55Q8WUE5 264 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 TMEM54Q969K7 222 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 FOXRED1Q96CU9 486 aaPredicted RBP13.94□□□□□ -0.18
MBD1-227ENST00000592060 JSRP1Q96MG2 331 aaPredicted RBP13.94□□□□□ -0.18
MBD1-227ENST00000592060 NECAB3Q96P71 396 aaPredicted RBP13.94□□□□□ -0.18
MBD1-227ENST00000592060 TMEM165Q9HC07 324 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 NPDC1Q9NQX5 325 aaPredicted RBP13.94□□□□□ -0.18
MBD1-227ENST00000592060 GLTPQ9NZD2 209 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 PTTG3PQ9NZH4 202 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 TCFL5Q9UL49 500 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 PADI1Q9ULC6 663 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 ING4Q9UNL4 249 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 NCKAP5O14513 1909 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 A0A0A6YYH2 397 aa13.94□□□□□ -0.18
MBD1-227ENST00000592060 A6NJ64 397 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms