RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 PPP1CBP62140 327 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 CBX1P83916 185 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 CD47Q08722 323 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 CDK5R2Q13319 367 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 DGCR6Q14129 220 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 ENDOGQ14249 297 aaKnown RBP8.8□□□□□ -1
VPS4B-207ENST00000591519 DCAF12L2Q5VW00 463 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 LCN8Q6JVE9 175 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 ARL9Q6T311 187 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 RFPL4BQ6ZWI9 263 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 ZER1Q7Z7L7 766 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 PEG10Q86TG7 708 aaKnown RBP8.8□□□□□ -1
VPS4B-207ENST00000591519 SPATA24Q86W54 205 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 CLDN22Q8N7P3 220 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 NANPQ8TBE9 248 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 ASB9Q96DX5 294 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 RBM4Q9BWF3 364 aaKnown RBP8.8□□□□□ -1
VPS4B-207ENST00000591519 CADM1Q9BY67 442 aaKnown RBP8.8□□□□□ -1
VPS4B-207ENST00000591519 MUC13Q9H3R2 512 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 IL1RAPQ9NPH3 570 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 IL20RAQ9UHF4 553 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 OPN4Q9UHM6 478 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 POLR3KQ9Y2Y1 108 aaPredicted RBP8.8□□□□□ -1
VPS4B-207ENST00000591519 ARHGAP32A7KAX9 2087 aa8.8□□□□□ -1
VPS4B-207ENST00000591519 UNC119BA6NIH7 251 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 H7C1C5 153 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 ACOT8O14734 319 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 OR10H3O60404 316 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 RGS9O75916 674 aaPredicted RBP8.79□□□□□ -1
VPS4B-207ENST00000591519 SCG5P05408 212 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 MSR1P21757 451 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 SLC9A3P48764 834 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 SMIM11AP58511 58 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 LCN6P62502 163 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 GLO1Q04760 184 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 PSG7Q13046 419 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 FLOT2Q14254 428 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 FAM98BQ52LJ0 330 aaKnown RBP8.79□□□□□ -1
VPS4B-207ENST00000591519 ZMAT1Q5H9K5 638 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 MTX3Q5HYI7 312 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 SPATA46Q5T0L3 261 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 ZNF774Q6NX45 483 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 TMPRSS11FQ6ZWK6 438 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 ABHD4Q8TB40 342 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 DVL3Q92997 716 aaPredicted RBP8.79□□□□□ -1
VPS4B-207ENST00000591519 RSRC1Q96IZ7 334 aaKnown RBP8.79□□□□□ -1
VPS4B-207ENST00000591519 SAMD8Q96LT4 415 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 SUCNR1Q9BXA5 334 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 PLA2G12AQ9BZM1 189 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 TRIM15Q9C019 465 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 ANKRD19PQ9H560 264 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 C7orf69Q9H7B7 122 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 POLE4Q9NR33 117 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 NDRG4Q9ULP0 352 aaKnown RBP8.79□□□□□ -1
VPS4B-207ENST00000591519 TMCC3Q9ULS5 477 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 TMEM5Q9Y2B1 443 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 TANC2Q9HCD6 1990 aa8.79□□□□□ -1
VPS4B-207ENST00000591519 TNFRSF11BO00300 401 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 GSC2O15499 205 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 FOXH1O75593 365 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 IGHV2-70P01814 119 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 CD14P08571 375 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 ADRA2CP18825 462 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 KITLGP21583 273 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 OMPP47874 163 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 TRAP1Q12931 704 aaKnown RBP8.78□□□□□ -1
VPS4B-207ENST00000591519 ZBED5Q49AG3 693 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 TMEM155Q4W5P6 130 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 SPRNQ5BIV9 151 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 FAM122BQ7Z309 247 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 LRRC28Q86X40 367 aaPredicted RBP8.78□□□□□ -1
VPS4B-207ENST00000591519 ADGRG5Q8IZF4 528 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 ZNF283Q8N7M2 679 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 NPEPL1Q8NDH3 523 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 OR9Q2Q8NGE9 314 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 GCDHQ92947 438 aaPredicted RBP8.78□□□□□ -1
VPS4B-207ENST00000591519 HAVCR1Q96D42 359 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 DHRS1Q96LJ7 313 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 GPA33Q99795 319 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 GAL3ST1Q99999 423 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 FUZQ9BT04 418 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 NTN4Q9HB63 628 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 MSL2Q9HCI7 577 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 KRCC1Q9NPI7 259 aaPredicted RBP8.78□□□□□ -1
VPS4B-207ENST00000591519 VNN3Q9NY84 501 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 ADAM18Q9Y3Q7 739 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 NPTNQ9Y639 398 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 U3KQV3 271 aa8.78□□□□□ -1
VPS4B-207ENST00000591519 DHRS12A0PJE2 317 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 PTP4A3O75365 173 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 ABHD16AO95870 558 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 ZNF26P17031 533 aaPredicted RBP8.77□□□□□ -1.01
VPS4B-207ENST00000591519 EGR1P18146 543 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 TNFRSF1AP19438 455 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 GSTM3P21266 225 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 CPT2P23786 658 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 FPR2P25090 351 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 ZFP36P26651 326 aaKnown RBP8.77□□□□□ -1.01
VPS4B-207ENST00000591519 SLC6A9P48067 706 aa8.77□□□□□ -1.01
VPS4B-207ENST00000591519 LSM6P62312 80 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms