RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 OR5L1Q8NGL2 311 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 OR4Q3Q8NH05 313 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 OTULINQ96BN8 352 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 COG8Q96MW5 612 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 DCLRE1CQ96SD1 692 aaKnown RBP10.3□□□□□ -0.76
TPM4-212ENST00000590180 DDOQ99489 341 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 NIPSNAP1Q9BPW8 284 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 BEX2Q9BXY8 128 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 CADM1Q9BY67 442 aaKnown RBP10.3□□□□□ -0.76
TPM4-212ENST00000590180 EGLN1Q9GZT9 426 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 POFUT1Q9H488 388 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 NARFLQ9H6Q4 476 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 MSL2Q9HCI7 577 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 TUBG2Q9NRH3 451 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 ZNF275Q9NSD4 429 aaPredicted RBP10.3□□□□□ -0.76
TPM4-212ENST00000590180 KLHL21Q9UJP4 597 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 BAIAP2Q9UQB8 552 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 POMPQ9Y244 141 aa10.3□□□□□ -0.76
TPM4-212ENST00000590180 MALRD1Q5VYJ5 2156 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 IGHV1-69-2A0A0G2JMI3 117 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 F5H5K5 113 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 H3BSA7 217 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 ICMTO60725 284 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 FKBP6O75344 327 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 IFNGP01579 166 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 IGHV1-46P01743 117 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 TACSTD2P09758 323 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 HOXB6P17509 224 aaKnown RBP10.29□□□□□ -0.76
TPM4-212ENST00000590180 PRKACGP22612 351 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 CRYBB2P43320 205 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 RGS6P49758 472 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 HIST1H3AP68431 136 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 CBX1P83916 185 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 CCNIQ14094 377 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 ZNF362Q5T0B9 420 aaPredicted RBP10.29□□□□□ -0.76
TPM4-212ENST00000590180 HIST2H3PS2Q5TEC6 136 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 FAM166AQ6J272 317 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 SLC18B1Q6NT16 456 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 USP51Q70EK9 711 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 HIST2H3AQ71DI3 136 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 TMEM179BQ7Z7N9 219 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 OR9Q1Q8NGQ5 310 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 TEX47Q8TBZ9 253 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 ZNRF4Q8WWF5 429 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 CCL17Q92583 94 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 HPS1Q92902 700 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 HAVCR1Q96D42 359 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 COQ7Q99807 217 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 HDHD2Q9H0R4 259 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 ZNF556Q9HAH1 456 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 SAP30LQ9HAJ7 183 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 MRPL22Q9NWU5 206 aaKnown RBP10.29□□□□□ -0.76
TPM4-212ENST00000590180 TREM2Q9NZC2 230 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 PTTG3PQ9NZH4 202 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 PURGQ9UJV8 347 aaKnown RBP10.29□□□□□ -0.76
TPM4-212ENST00000590180 ZDHHC8Q9ULC8 765 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 KCNS2Q9ULS6 477 aa10.29□□□□□ -0.76
TPM4-212ENST00000590180 ZSCAN5BA6NJL1 495 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 RIIAD1A6NNX1 92 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 ATP5HO75947 161 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 FMO3P31513 532 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 IL2RGP31785 369 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 GGT2P36268 569 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 RPS27P42677 84 aaKnown RBP10.28□□□□□ -0.76
TPM4-212ENST00000590180 MVKQ03426 396 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 ECH1Q13011 328 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 CRMP1Q14194 572 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 HLXQ14774 488 aaPredicted RBP10.28□□□□□ -0.76
TPM4-212ENST00000590180 HFEQ30201 348 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 ZMAT1Q5H9K5 638 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 TMEM255AQ5JRV8 349 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 FAM209AQ5JX71 171 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 CD300LDQ6UXZ3 194 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 CFAP77Q6ZQR2 320 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 PRIMA1Q86XR5 153 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 ZNF511Q8NB15 262 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 APOBEC3DQ96AK3 386 aaPredicted RBP10.28□□□□□ -0.76
TPM4-212ENST00000590180 ELMOD3Q96FG2 381 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 SOX7Q9BT81 388 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 SHARPINQ9H0F6 387 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 DNAJB9Q9UBS3 223 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 CYB5R1Q9UHQ9 305 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 ATPIF1Q9UII2 106 aa10.28□□□□□ -0.76
TPM4-212ENST00000590180 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.27□□□□□ -0.775e-6■■■■□ 22.8
TPM4-212ENST00000590180 TCRBV3S1A0A5B6 114 aa10.27□□□□□ -0.77
TPM4-212ENST00000590180 ZNF593O00488 134 aaPredicted RBP10.27□□□□□ -0.77
TPM4-212ENST00000590180 WNT9BO14905 357 aa10.27□□□□□ -0.77
TPM4-212ENST00000590180 RP2O75695 350 aa10.27□□□□□ -0.77
TPM4-212ENST00000590180 LCATP04180 440 aa10.27□□□□□ -0.77
TPM4-212ENST00000590180 GYPBP06028 91 aa10.27□□□□□ -0.77
TPM4-212ENST00000590180 SPARCP09486 303 aa10.27□□□□□ -0.77
TPM4-212ENST00000590180 RAC2P15153 192 aa10.27□□□□□ -0.77
TPM4-212ENST00000590180 KITLGP21583 273 aa10.27□□□□□ -0.77
TPM4-212ENST00000590180 TNFSF4P23510 183 aa10.27□□□□□ -0.77
TPM4-212ENST00000590180 SLC25A1P53007 311 aa10.27□□□□□ -0.77
TPM4-212ENST00000590180 TPTEP56180 551 aa10.27□□□□□ -0.77
TPM4-212ENST00000590180 TNFAIP6P98066 277 aaPredicted RBP10.27□□□□□ -0.77
TPM4-212ENST00000590180 CDK5R2Q13319 367 aa10.27□□□□□ -0.77
TPM4-212ENST00000590180 GINS1Q14691 196 aa10.27□□□□□ -0.77
TPM4-212ENST00000590180 TAF13Q15543 124 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms