RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 IPCEF1Q8WWN9 437 aaPredicted RBP18.32■□□□□ 0.52
ATG4D-212ENST00000590096 SYT3Q9BQG1 590 aa18.32■□□□□ 0.52
ATG4D-212ENST00000590096 TOR3AQ9H497 397 aa18.32■□□□□ 0.52
ATG4D-212ENST00000590096 DYNLRB1Q9NP97 96 aa18.32■□□□□ 0.52
ATG4D-212ENST00000590096 PNRC2Q9NPJ4 139 aaKnown RBP18.32■□□□□ 0.52
ATG4D-212ENST00000590096 TBCCD1Q9NVR7 557 aa18.32■□□□□ 0.52
ATG4D-212ENST00000590096 AKAP9Q99996 3911 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 H7C417 338 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 DBHP09172 617 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 PSKH1P11801 424 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 GCH1P30793 250 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 RGS6P49758 472 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 KLF3P57682 345 aaPredicted RBP18.31■□□□□ 0.52
ATG4D-212ENST00000590096 PPP1CBP62140 327 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 TAF13Q15543 124 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 TESK1Q15569 626 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 MSMPQ1L6U9 139 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 ZNF718Q3SXZ3 478 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 SPATA46Q5T0L3 261 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 NXNL2Q5VZ03 156 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 SHEQ5VZ18 495 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 GID4Q8IVV7 300 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 TIGD4Q8IY51 512 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 OR8J1Q8NGP2 316 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 FAM81AQ8TBF8 368 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 SPTSSAQ969W0 71 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 HRASLS5Q96KN8 279 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 COG8Q96MW5 612 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 TEAD3Q99594 435 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 IMPAD1Q9NX62 359 aa18.31■□□□□ 0.52
ATG4D-212ENST00000590096 PRRC2AP48634 2157 aaKnown RBP18.3■□□□□ 0.52
ATG4D-212ENST00000590096 ARFGEF3Q5TH69 2177 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 A0A1W2PPW3 197 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 TMEM129A0AVI4 362 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 F5H5K5 113 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 SELENOFO60613 162 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 NGFP01138 241 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 ZNF250P15622 560 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 NAA10P41227 235 aaPredicted RBP18.3■□□□□ 0.52
ATG4D-212ENST00000590096 PPOXP50336 477 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 EFNB1P98172 346 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 Q5PR19 223 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 MEPCEQ7L2J0 689 aaKnown RBP18.3■□□□□ 0.52
ATG4D-212ENST00000590096 LRP11Q86VZ4 500 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 SLC25A40Q8TBP6 338 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 SLAMF6Q96DU3 332 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 DOK1Q99704 481 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 VRK1Q99986 396 aaPredicted RBP18.3■□□□□ 0.52
ATG4D-212ENST00000590096 COPS4Q9BT78 406 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 DCLRE1BQ9H816 532 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 BARX1Q9HBU1 254 aaPredicted RBP18.3■□□□□ 0.52
ATG4D-212ENST00000590096 CENPMQ9NSP4 180 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 DDX28Q9NUL7 540 aaKnown RBP18.3■□□□□ 0.52
ATG4D-212ENST00000590096 GPR160Q9UJ42 338 aa18.3■□□□□ 0.52
ATG4D-212ENST00000590096 CCDC182A6NF36 153 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 SLC22A31A6NKX4 558 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 ZNF878C9JN71 531 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 H3BSA7 217 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 J3QW42 95 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 M0R233 179 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 TUBG1P23258 451 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 TPTEP56180 551 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 MOGQ16653 247 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 LRRC36Q1X8D7 754 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 BCDIN3DQ7Z5W3 292 aaKnown RBP18.29■□□□□ 0.52
ATG4D-212ENST00000590096 GALNT4Q8N4A0 578 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 ZNF454Q8N9F8 522 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 OR10S1Q8NGN2 331 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 ST7LQ8TDW4 575 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 APOBEC3DQ96AK3 386 aaPredicted RBP18.29■□□□□ 0.52
ATG4D-212ENST00000590096 MBOAT4Q96T53 435 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 OR2J1Q9GZK6 312 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 C8orf4Q9NR00 106 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 TUBG2Q9NRH3 451 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 SLCO1C1Q9NYB5 712 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 MTORP42345 2549 aa18.29■□□□□ 0.52
ATG4D-212ENST00000590096 CLPTM1O96005 669 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 IGHV4-39P01824 125 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 ERCC1P07992 297 aaPredicted RBP18.28■□□□□ 0.52
ATG4D-212ENST00000590096 SLC15A1P46059 708 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 NUDT6P53370 316 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 NKPD1Q17RQ9 610 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 KRTAP27-1Q3LI81 207 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 AADACL4Q5VUY2 407 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 LPCAT4Q643R3 524 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 PRSS57Q6UWY2 283 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 SLC16A9Q7RTY1 509 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 OR5L1Q8NGL2 311 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 OTOSQ8NHW6 89 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 TRUB1Q8WWH5 349 aaKnown RBP18.28■□□□□ 0.52
ATG4D-212ENST00000590096 MARS2Q96GW9 593 aaKnown RBP18.28■□□□□ 0.52
ATG4D-212ENST00000590096 RDH12Q96NR8 316 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 ABHD6Q9BV23 337 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 RAB1BQ9H0U4 201 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 SMPD3Q9NY59 655 aaPredicted RBP18.28■□□□□ 0.52
ATG4D-212ENST00000590096 TAAR3PQ9P1P4 343 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 MYEF2Q9P2K5 600 aaKnown RBP18.28■□□□□ 0.52
ATG4D-212ENST00000590096 GMPPBQ9Y5P6 360 aa18.28■□□□□ 0.52
ATG4D-212ENST00000590096 IGLV3-9A0A075B6K5 115 aa18.27■□□□□ 0.52
ATG4D-212ENST00000590096 H0YHG0 523 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms