RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	PXK	Q7Z7A4	578 aa		13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	TPRA1	Q86W33	373 aa		13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	CLEC1A	Q8NC01	280 aa		13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	PCNP	Q8WW12	178 aa	Known RBP	13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	ASB10	Q8WXI3	467 aa		13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	MIB2	Q96AX9	1013 aa		13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	RERGL	Q9H628	205 aa		13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318	BABAM2	Q9NXR7	383 aa		13.73	□□□□□ -0.21
DDX39A-209	ENST00000589318		G3V3Q6	166 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	XKRY	O14609	159 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	EEF1E1	O43324	174 aa	Known RBP	13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	SC5D	O75845	299 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	SNAPIN	O95295	136 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	IFNA4	P05014	189 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	CPN1	P15169	458 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	IFNGR1	P15260	489 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	CD53	P19397	219 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	KLK2	P20151	261 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	CNR1	P21554	472 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	NFYA	P23511	347 aa	Predicted RBP	13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	MAPK3	P27361	379 aa	Predicted RBP	13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	OR12D2	P58182	307 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	HSF1	Q00613	529 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	MADCAM1	Q13477	382 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	PDSS1	Q5T2R2	415 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	ZNF248	Q8NDW4	579 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	C4orf36	Q96KX1	117 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	BIN3	Q9NQY0	253 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	COA4	Q9NYJ1	87 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	IGLV1-36	A0A0B4J1U3	117 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	NAP1L6	A6NFF2	107 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	HMSD	A8MTL9	139 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318		E9PI62	339 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	LANCL1	O43813	399 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	RAMP1	O60894	148 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	RGS9	O75916	674 aa	Predicted RBP	13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	UBL3	O95164	117 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	WT1	P19544	449 aa	Predicted RBP	13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	CEL	P19835	753 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	POU3F1	Q03052	451 aa	Predicted RBP	13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	TRAM1	Q15629	374 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	TMPPE	Q6ZT21	453 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	SLC35D2	Q76EJ3	337 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	CDH26	Q8IXH8	852 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	UTP23	Q9BRU9	249 aa	Known RBP	13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	HES7	Q9BYE0	225 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	TTTY10	Q9BZA0	68 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	CCDC86	Q9H6F5	360 aa	Known RBP	13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	METTL17	Q9H7H0	456 aa	Predicted RBP	13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	MED29	Q9NX70	200 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318	B9D1	Q9UPM9	204 aa		13.72	□□□□□ -0.21
DDX39A-209	ENST00000589318		A0A1B0GUH1	482 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	SMIM30	A4D0T7	59 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	PRR32	B1ATL7	298 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	CTDSPL	O15194	276 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	MAGEB4	O15481	346 aa	Predicted RBP	13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	GSTZ1	O43708	216 aa	Predicted RBP	13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	AQP8	O94778	261 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	PMS2P2	O95744	297 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	GPANK1	O95872	356 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	MT-ND5	P03915	603 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	PPP3CB	P16298	524 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	CTLA4	P16410	223 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	GIF	P27352	417 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	MEOX2	P50222	304 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	SOX8	P57073	446 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	IDNK	Q5T6J7	187 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	LINC00696	Q6ZRV3	163 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	SLC16A9	Q7RTY1	509 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	GALNT16	Q8N428	558 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	KCNK17	Q96T54	332 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	PIGQ	Q9BRB3	760 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	PLA2G3	Q9NZ20	509 aa		13.71	□□□□□ -0.21
DDX39A-209	ENST00000589318	ARGFX	A6NJG6	315 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	NPIPA5	E9PKD4	350 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318		J3QLW9	94 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	SULT2B1	O00204	365 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	NKX2-8	O15522	239 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	LPL	P06858	475 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	ZNF19	P17023	458 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	S100A11	P31949	105 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	CASR	P41180	1078 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	DAP3	P51398	398 aa	Known RBP	13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	ZP1	P60852	638 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	RAC1	P63000	192 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	H3F3A	P84243	136 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	RTP5	Q14D33	572 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	OR1C1	Q15619	314 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	PGAP1	Q75T13	922 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	YRDC	Q86U90	279 aa	Known RBP	13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	OR2M7	Q8NG81	312 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	OR4D10	Q8NGI6	311 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	HSD17B8	Q92506	261 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	ELMOD3	Q96FG2	381 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	CXorf58	Q96LI9	332 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	SLC25A32	Q9H2D1	315 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	ABI3	Q9P2A4	366 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	MLX	Q9UH92	298 aa		13.7	□□□□□ -0.22
DDX39A-209	ENST00000589318	NPIPA1	Q9UND3	350 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms