RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 SLC30A2Q9BRI3 323 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 TMEM246Q9BRR3 403 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 ANKRD19PQ9H560 264 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 NMNAT1Q9HAN9 279 aaPredicted RBP11.7□□□□□ -0.54
VMP1-209ENST00000588915 NOX4Q9NPH5 578 aa11.7□□□□□ -0.54
VMP1-209ENST00000588915 A0A087WUU8 490 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 IQCF6A8MYZ5 107 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 HMGB1P1B2RPK0 211 aaPredicted RBP11.69□□□□□ -0.54
VMP1-209ENST00000588915 H7C1C5 153 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 MRASO14807 208 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 CTLA4P16410 223 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 SELEP16581 610 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 MDKP21741 143 aaPredicted RBP11.69□□□□□ -0.54
VMP1-209ENST00000588915 GATA4P43694 442 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 LCN6P62502 163 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 HIST1H3AP68431 136 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 HNRNPA0Q13151 305 aaKnown RBP11.69□□□□□ -0.54
VMP1-209ENST00000588915 ZNF404Q494X3 552 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 CCDC92Q53HC0 331 aaPredicted RBP11.69□□□□□ -0.54
VMP1-209ENST00000588915 HIST2H3PS2Q5TEC6 136 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 OR2T2Q6IF00 324 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 C1orf94Q6P1W5 598 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 PGM2L1Q6PCE3 622 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 ZNF730Q6ZMV8 503 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 DCDC5Q6ZRR9 648 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 HIST2H3AQ71DI3 136 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 RRM2BQ7LG56 351 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 MICU2Q8IYU8 434 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 TMEM86BQ8N661 226 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 CELF2-AS1Q8N7Q2 184 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 GJC3Q8NFK1 279 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 OR13C2Q8NGS9 318 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 OR4F5Q8NH21 305 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 ZNF570Q96NI8 536 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 BEX1Q9HBH7 125 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 VSX1Q9NZR4 365 aaPredicted RBP11.69□□□□□ -0.54
VMP1-209ENST00000588915 ASH2LQ9UBL3 628 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 TMEM5Q9Y2B1 443 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 ADAM18Q9Y3Q7 739 aa11.69□□□□□ -0.54
VMP1-209ENST00000588915 TGP01266 2768 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 TRAV40A0A0B4J280 105 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 SRRM5B3KS81 715 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 CDC42EP2O14613 210 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 PHYHO14832 338 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 FFAR1O14842 300 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 PTP4A3O75365 173 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 GPANK1O95872 356 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 CYB5R3P00387 301 aaPredicted RBP11.68□□□□□ -0.54
VMP1-209ENST00000588915 SDHAP31040 664 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 RBMXP38159 391 aaKnown RBP11.68□□□□□ -0.54
VMP1-209ENST00000588915 PITPNBP48739 271 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 NPY4RP50391 375 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 ERFP50548 548 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 RPL15P61313 204 aaKnown RBP11.68□□□□□ -0.54
VMP1-209ENST00000588915 KLF10Q13118 480 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 SPATC1Q76KD6 591 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 ADCK1Q86TW2 530 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 OR5AS1Q8N127 324 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 FITM2Q8N6M3 262 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 OR10S1Q8NGN2 331 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 ZNF420Q8TAQ5 688 aaPredicted RBP11.68□□□□□ -0.54
VMP1-209ENST00000588915 SLC7A6Q92536 515 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 ZDHHC16Q969W1 377 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 FAM71F1Q96KD3 344 aaPredicted RBP11.68□□□□□ -0.54
VMP1-209ENST00000588915 COQ7Q99807 217 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 NUDT16L1Q9BRJ7 211 aaKnown RBP11.68□□□□□ -0.54
VMP1-209ENST00000588915 HDHD2Q9H0R4 259 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 NRIP3Q9NQ35 241 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 TMEM100Q9NV29 134 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 CLN8Q9UBY8 286 aa11.68□□□□□ -0.54
VMP1-209ENST00000588915 COA3Q9Y2R0 106 aaPredicted RBP11.68□□□□□ -0.54
VMP1-209ENST00000588915 CMYA5Q8N3K9 4069 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 J3KTA2 159 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 HOXA3O43365 443 aaPredicted RBP11.67□□□□□ -0.54
VMP1-209ENST00000588915 SLC16A7O60669 478 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 NDUFB2O95178 105 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 NDUFA7O95182 113 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 KNG1P01042 644 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 CRYBA1P05813 215 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 LIPFP07098 398 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 IRF2P14316 349 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 FUT4P22083 530 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 YAP1P46937 504 aaKnown RBP11.67□□□□□ -0.54
VMP1-209ENST00000588915 KRR1Q13601 381 aaKnown RBP11.67□□□□□ -0.54
VMP1-209ENST00000588915 HLXQ14774 488 aaPredicted RBP11.67□□□□□ -0.54
VMP1-209ENST00000588915 GPR157Q5UAW9 335 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 WDR25Q64LD2 544 aaPredicted RBP11.67□□□□□ -0.54
VMP1-209ENST00000588915 COLCA1Q6ZS62 124 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 ARPINQ7Z6K5 226 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 OR10AD1Q8NGE0 317 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 Q8TCH9 128 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 GPX7Q96SL4 187 aaPredicted RBP11.67□□□□□ -0.54
VMP1-209ENST00000588915 HCAR1Q9BXC0 346 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 TMEM120AQ9BXJ8 343 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 SYT4Q9H2B2 425 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 PTTG3PQ9NZH4 202 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 RHCGQ9UBD6 479 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 SIGLEC7Q9Y286 467 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 SNX13Q9Y5W8 968 aa11.67□□□□□ -0.54
VMP1-209ENST00000588915 POMT1Q9Y6A1 747 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms