RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 ARF6P62330 175 aa18.02■□□□□ 0.48
CAPNS1-205ENST00000588780 ALG10Q5BKT4 473 aa18.02■□□□□ 0.48
CAPNS1-205ENST00000588780 OXLD1Q5BKU9 147 aa18.02■□□□□ 0.48
CAPNS1-205ENST00000588780 ANKRD42Q8N9B4 389 aa18.02■□□□□ 0.48
CAPNS1-205ENST00000588780 BOLLQ8N9W6 283 aaKnown RBP18.02■□□□□ 0.48
CAPNS1-205ENST00000588780 C11orf65Q8NCR3 313 aa18.02■□□□□ 0.48
CAPNS1-205ENST00000588780 GPR32P1Q8NGA4 272 aa18.02■□□□□ 0.48
CAPNS1-205ENST00000588780 OR4D11Q8NGI4 311 aa18.02■□□□□ 0.48
CAPNS1-205ENST00000588780 OR5L1Q8NGL2 311 aa18.02■□□□□ 0.48
CAPNS1-205ENST00000588780 SLC7A6Q92536 515 aa18.02■□□□□ 0.48
CAPNS1-205ENST00000588780 ZNF426Q9BUY5 554 aa18.02■□□□□ 0.48
CAPNS1-205ENST00000588780 IKZF5Q9H5V7 419 aa18.02■□□□□ 0.48
CAPNS1-205ENST00000588780 SSU72Q9NP77 194 aaKnown RBP18.02■□□□□ 0.48
CAPNS1-205ENST00000588780 NECAP2Q9NVZ3 263 aa18.02■□□□□ 0.48
CAPNS1-205ENST00000588780 TSPAN9O75954 239 aa18.01■□□□□ 0.47
CAPNS1-205ENST00000588780 FSTL3O95633 263 aa18.01■□□□□ 0.47
CAPNS1-205ENST00000588780 TGFBR2P37173 567 aa18.01■□□□□ 0.47
CAPNS1-205ENST00000588780 DBPQ10586 325 aaPredicted RBP18.01■□□□□ 0.47
CAPNS1-205ENST00000588780 CYP51A1Q16850 503 aa18.01■□□□□ 0.47
CAPNS1-205ENST00000588780 TSPYL5Q86VY4 417 aaPredicted RBP18.01■□□□□ 0.47
CAPNS1-205ENST00000588780 GALNT4Q8N4A0 578 aa18.01■□□□□ 0.47
CAPNS1-205ENST00000588780 MAELQ96JY0 434 aaKnown RBP18.01■□□□□ 0.47
CAPNS1-205ENST00000588780 POLE4Q9NR33 117 aa18.01■□□□□ 0.47
CAPNS1-205ENST00000588780 VPREB3Q9UKI3 123 aa18.01■□□□□ 0.47
CAPNS1-205ENST00000588780 CAB39Q9Y376 341 aaPredicted RBP18.01■□□□□ 0.47
CAPNS1-205ENST00000588780 GPX2P18283 190 aa18■□□□□ 0.47
CAPNS1-205ENST00000588780 GABRA5P31644 462 aa18■□□□□ 0.47
CAPNS1-205ENST00000588780 PMELP40967 661 aa18■□□□□ 0.47
CAPNS1-205ENST00000588780 RPL27P61353 136 aaKnown RBP18■□□□□ 0.47
CAPNS1-205ENST00000588780 KCNJ8Q15842 424 aa18■□□□□ 0.47
CAPNS1-205ENST00000588780 TMEM255BQ8WV15 326 aa18■□□□□ 0.47
CAPNS1-205ENST00000588780 PRSS27Q9BQR3 290 aa18■□□□□ 0.47
CAPNS1-205ENST00000588780 TOR3AQ9H497 397 aa18■□□□□ 0.47
CAPNS1-205ENST00000588780 C20orf141Q9NUB4 165 aa18■□□□□ 0.47
CAPNS1-205ENST00000588780 UFSP2Q9NUQ7 469 aa18■□□□□ 0.47
CAPNS1-205ENST00000588780 TMEM100Q9NV29 134 aa18■□□□□ 0.47
CAPNS1-205ENST00000588780 AURKAIP1Q9NWT8 199 aaPredicted RBP18■□□□□ 0.47
CAPNS1-205ENST00000588780 NPIPB13A6NJU9 1138 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 NPIPB4C9JG80 1138 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 GPR37O15354 613 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 MLNRO43193 412 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 ADAM20O43506 726 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 HLA-DPB1P04440 258 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 FBP1P09467 338 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 FPR3P25089 353 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 PSMB10P40306 273 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 TAS2R41P59536 307 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 MPP2Q14168 576 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 PAGE3Q5JUK9 113 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 SFRP4Q6FHJ7 346 aaPredicted RBP17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 SLC35E4Q6ICL7 350 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 IGFN1Q86VF2 1251 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 NKAIN4Q8IVV8 208 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 RASD2Q96D21 266 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 SPDL1Q96EA4 605 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 PPA2Q9H2U2 334 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 USH1CQ9Y6N9 552 aa17.99■□□□□ 0.47
CAPNS1-205ENST00000588780 XPNPEP2O43895 674 aa17.98■□□□□ 0.47
CAPNS1-205ENST00000588780 SCG5P05408 212 aa17.98■□□□□ 0.47
CAPNS1-205ENST00000588780 CTXN1P60606 82 aa17.98■□□□□ 0.47
CAPNS1-205ENST00000588780 OR8B8Q15620 311 aa17.98■□□□□ 0.47
CAPNS1-205ENST00000588780 FOXL2NBQ6ZUU3 175 aa17.98■□□□□ 0.47
CAPNS1-205ENST00000588780 TMEM239Q8WW34 195 aa17.98■□□□□ 0.47
CAPNS1-205ENST00000588780 ZBTB9Q96C00 473 aa17.98■□□□□ 0.47
CAPNS1-205ENST00000588780 WACQ9BTA9 647 aa17.98■□□□□ 0.47
CAPNS1-205ENST00000588780 SIRPDQ9H106 197 aa17.98■□□□□ 0.47
CAPNS1-205ENST00000588780 SEMA6AQ9H2E6 1030 aa17.98■□□□□ 0.47
CAPNS1-205ENST00000588780 CCDC167Q9P0B6 97 aa17.98■□□□□ 0.47
CAPNS1-205ENST00000588780 CTSZQ9UBR2 303 aa17.98■□□□□ 0.47
CAPNS1-205ENST00000588780 MED31Q9Y3C7 131 aa17.98■□□□□ 0.47
CAPNS1-205ENST00000588780 A6NIZ1 184 aa17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 H7C1C5 153 aa17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 FAM20BO75063 409 aa17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 RBM34P42696 430 aaKnown RBP17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 RGS6P49758 472 aa17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 RAP1BP61224 184 aa17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 LCN6P62502 163 aa17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 RAP1AP62834 184 aa17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 COX10Q12887 443 aa17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 FBXW12Q6X9E4 464 aa17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 PIP4P2Q8N4L2 257 aa17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 PCYOX1LQ8NBM8 494 aa17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 ITPKCQ96DU7 683 aa17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 WDR76Q9H967 626 aa17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 RYR3Q15413 4870 aa17.97■□□□□ 0.47
CAPNS1-205ENST00000588780 FBP2O00757 339 aa17.96■□□□□ 0.47
CAPNS1-205ENST00000588780 PAHP00439 452 aa17.96■□□□□ 0.47
CAPNS1-205ENST00000588780 INTS11Q5TA45 600 aaKnown RBP17.96■□□□□ 0.47
CAPNS1-205ENST00000588780 PRAMEF6Q5VXH4 476 aa17.96■□□□□ 0.47
CAPNS1-205ENST00000588780 BLOC1S3Q6QNY0 202 aa17.96■□□□□ 0.47
CAPNS1-205ENST00000588780 MAVSQ7Z434 540 aa17.96■□□□□ 0.47
CAPNS1-205ENST00000588780 PATL1Q86TB9 770 aaKnown RBP17.96■□□□□ 0.47
CAPNS1-205ENST00000588780 OR1F12Q8NHA8 337 aa17.96■□□□□ 0.47
CAPNS1-205ENST00000588780 TMEM109Q9BVC6 243 aa17.96■□□□□ 0.47
CAPNS1-205ENST00000588780 HCAR1Q9BXC0 346 aa17.96■□□□□ 0.47
CAPNS1-205ENST00000588780 PCDHAC1Q9H158 963 aa17.96■□□□□ 0.47
CAPNS1-205ENST00000588780 FOXJ3Q9UPW0 622 aa17.96■□□□□ 0.47
CAPNS1-205ENST00000588780 SIGLEC9Q9Y336 463 aa17.96■□□□□ 0.47
CAPNS1-205ENST00000588780 SNNO75324 88 aaPredicted RBP17.95■□□□□ 0.46
CAPNS1-205ENST00000588780 DBHP09172 617 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms