RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 SPATA46Q5T0L3 261 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 DCXRQ7Z4W1 244 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 ERI1Q8IV48 349 aaKnown RBP17.33■□□□□ 0.36
DDX39A-207ENST00000588542 TCEANCQ8N8B7 351 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 ABHD4Q8TB40 342 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 SYNPRQ8TBG9 265 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 SLC25A40Q8TBP6 338 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 ST7LQ8TDW4 575 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 DCLRE1CQ96SD1 692 aaKnown RBP17.33■□□□□ 0.36
DDX39A-207ENST00000588542 INTS14Q96SY0 518 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 ATF6BQ99941 703 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 PRRG3Q9BZD7 231 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 POFUT1Q9H488 388 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 TBCCD1Q9NVR7 557 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 DUSP13Q9UII6 198 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 MED13LQ71F56 2210 aa17.33■□□□□ 0.36
DDX39A-207ENST00000588542 F8P00451 2351 aa17.32■□□□□ 0.36
DDX39A-207ENST00000588542 CCDC182A6NF36 153 aa17.32■□□□□ 0.36
DDX39A-207ENST00000588542 ERICH4A6NGS2 130 aa17.32■□□□□ 0.36
DDX39A-207ENST00000588542 TLX2O43763 284 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-207ENST00000588542 MPV17P39210 176 aa17.32■□□□□ 0.36
DDX39A-207ENST00000588542 ARL9Q6T311 187 aa17.32■□□□□ 0.36
DDX39A-207ENST00000588542 UNQ6126/PRO20091Q6UXV3 157 aa17.32■□□□□ 0.36
DDX39A-207ENST00000588542 DPY19L4Q7Z388 723 aa17.32■□□□□ 0.36
DDX39A-207ENST00000588542 BCDIN3DQ7Z5W3 292 aaKnown RBP17.32■□□□□ 0.36
DDX39A-207ENST00000588542 TGIF2LYQ8IUE0 185 aa17.32■□□□□ 0.36
DDX39A-207ENST00000588542 C1orf174Q8IYL3 243 aa17.32■□□□□ 0.36
DDX39A-207ENST00000588542 ZCCHC24Q8N2G6 241 aaKnown RBP17.32■□□□□ 0.36
DDX39A-207ENST00000588542 OR6N2Q8NGY6 317 aa17.32■□□□□ 0.36
DDX39A-207ENST00000588542 TMEM163Q8TC26 289 aa17.32■□□□□ 0.36
DDX39A-207ENST00000588542 SORCS2Q96PQ0 1159 aa17.32■□□□□ 0.36
DDX39A-207ENST00000588542 OR2J1Q9GZK6 312 aa17.32■□□□□ 0.36
DDX39A-207ENST00000588542 DDX28Q9NUL7 540 aaKnown RBP17.32■□□□□ 0.36
DDX39A-207ENST00000588542 STARD10Q9Y365 291 aa17.32■□□□□ 0.36
DDX39A-207ENST00000588542 SELENOFO60613 162 aa17.31■□□□□ 0.36
DDX39A-207ENST00000588542 ANPEPP15144 967 aa17.31■□□□□ 0.36
DDX39A-207ENST00000588542 RAD23AP54725 363 aa17.31■□□□□ 0.36
DDX39A-207ENST00000588542 KLF3P57682 345 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-207ENST00000588542 ECH1Q13011 328 aa17.31■□□□□ 0.36
DDX39A-207ENST00000588542 MAD2L1BPQ15013 274 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-207ENST00000588542 ZNF718Q3SXZ3 478 aa17.31■□□□□ 0.36
DDX39A-207ENST00000588542 ZIK1Q3SY52 487 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-207ENST00000588542 AADACL4Q5VUY2 407 aa17.31■□□□□ 0.36
DDX39A-207ENST00000588542 ZBTB49Q6ZSB9 765 aa17.31■□□□□ 0.36
DDX39A-207ENST00000588542 KLF14Q8TD94 323 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-207ENST00000588542 IL4I1Q96RQ9 567 aa17.31■□□□□ 0.36
DDX39A-207ENST00000588542 MBOAT4Q96T53 435 aa17.31■□□□□ 0.36
DDX39A-207ENST00000588542 TEAD3Q99594 435 aa17.31■□□□□ 0.36
DDX39A-207ENST00000588542 VRK1Q99986 396 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-207ENST00000588542 FBXO9Q9UK97 447 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-207ENST00000588542 ORC6Q9Y5N6 252 aa17.31■□□□□ 0.36
DDX39A-207ENST00000588542 ACANP16112 2415 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 IGHV3-13P01766 116 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 ADRA2AP08913 450 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 ACSM4P0C7M7 580 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 OTX1P32242 354 aaPredicted RBP17.3■□□□□ 0.36
DDX39A-207ENST00000588542 ALDH3B1P43353 468 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 RCN1Q15293 331 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 MBNL2Q5VZF2 373 aaKnown RBP17.3■□□□□ 0.36
DDX39A-207ENST00000588542 DNM1P46Q6ZS02 220 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 COLCA1Q6ZS62 124 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 NAA40Q86UY6 237 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 IPCEF1Q8WWN9 437 aaPredicted RBP17.3■□□□□ 0.36
DDX39A-207ENST00000588542 EME1Q96AY2 570 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 SLAMF6Q96DU3 332 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 Q96MF0 132 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 AMELYQ99218 206 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 TOR3AQ9H497 397 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 BARX1Q9HBU1 254 aaPredicted RBP17.3■□□□□ 0.36
DDX39A-207ENST00000588542 TAAR3PQ9P1P4 343 aa17.3■□□□□ 0.36
DDX39A-207ENST00000588542 H3BSA7 217 aa17.29■□□□□ 0.36
DDX39A-207ENST00000588542 M0R233 179 aa17.29■□□□□ 0.36
DDX39A-207ENST00000588542 SSX4O60224 188 aa17.29■□□□□ 0.36
DDX39A-207ENST00000588542 LY6HO94772 140 aa17.29■□□□□ 0.36
DDX39A-207ENST00000588542 F12P00748 615 aaPredicted RBP17.29■□□□□ 0.36
DDX39A-207ENST00000588542 RGS6P49758 472 aa17.29■□□□□ 0.36
DDX39A-207ENST00000588542 EFNA4P52798 201 aa17.29■□□□□ 0.36
DDX39A-207ENST00000588542 RPS7P62081 194 aaKnown RBP17.29■□□□□ 0.36
DDX39A-207ENST00000588542 EIF2B1Q14232 305 aaKnown RBP17.29■□□□□ 0.36
DDX39A-207ENST00000588542 NXNL2Q5VZ03 156 aa17.29■□□□□ 0.36
DDX39A-207ENST00000588542 MEPCEQ7L2J0 689 aaKnown RBP17.29■□□□□ 0.36
DDX39A-207ENST00000588542 SHFQ7M4L6 423 aa17.29■□□□□ 0.36
DDX39A-207ENST00000588542 HRASLS5Q96KN8 279 aa17.29■□□□□ 0.36
DDX39A-207ENST00000588542 ABHD6Q9BV23 337 aa17.29■□□□□ 0.36
DDX39A-207ENST00000588542 C1QTNF5Q9BXJ0 243 aa17.29■□□□□ 0.36
DDX39A-207ENST00000588542 DYNLRB1Q9NP97 96 aa17.29■□□□□ 0.36
DDX39A-207ENST00000588542 A0A1W2PPW3 197 aa17.28■□□□□ 0.36
DDX39A-207ENST00000588542 F5H5K5 113 aa17.28■□□□□ 0.36
DDX39A-207ENST00000588542 J3QW42 95 aa17.28■□□□□ 0.36
DDX39A-207ENST00000588542 TUBG1P23258 451 aa17.28■□□□□ 0.36
DDX39A-207ENST00000588542 GCH1P30793 250 aa17.28■□□□□ 0.36
DDX39A-207ENST00000588542 NAA10P41227 235 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-207ENST00000588542 SELENOVP59797 346 aa17.28■□□□□ 0.36
DDX39A-207ENST00000588542 ELF3P78545 371 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-207ENST00000588542 CLEC12BQ2HXU8 276 aa17.28■□□□□ 0.36
DDX39A-207ENST00000588542 ALKBH6Q3KRA9 238 aa17.28■□□□□ 0.36
DDX39A-207ENST00000588542 OTOSQ8NHW6 89 aa17.28■□□□□ 0.36
DDX39A-207ENST00000588542 RNF133Q8WVZ7 376 aa17.28■□□□□ 0.36
DDX39A-207ENST00000588542 UBE2FQ969M7 185 aa17.28■□□□□ 0.36
DDX39A-207ENST00000588542 APOBEC3DQ96AK3 386 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms