RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 PTP4A1Q93096 173 aa16.63■□□□□ 0.25
TPM4-208ENST00000588410 CLPTM1LQ96KA5 538 aa16.63■□□□□ 0.25
TPM4-208ENST00000588410 COQ7Q99807 217 aa16.63■□□□□ 0.25
TPM4-208ENST00000588410 POFUT1Q9H488 388 aa16.63■□□□□ 0.25
TPM4-208ENST00000588410 PURGQ9UJV8 347 aaKnown RBP16.63■□□□□ 0.25
TPM4-208ENST00000588410 LHFPL6Q9Y693 200 aa16.63■□□□□ 0.25
TPM4-208ENST00000588410 U3KQV3 271 aa16.63■□□□□ 0.25
TPM4-208ENST00000588410 RTTNQ86VV8 2226 aa16.63■□□□□ 0.25
TPM4-208ENST00000588410 WNT9BO14905 357 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 ADH4P08319 380 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 DBHP09172 617 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 RAP2AP10114 183 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 DVL1P1P54792 670 aaPredicted RBP16.62■□□□□ 0.25
TPM4-208ENST00000588410 HIST1H3AP68431 136 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 TNFAIP6P98066 277 aaPredicted RBP16.62■□□□□ 0.25
TPM4-208ENST00000588410 SLC3A1Q07837 685 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 COX10Q12887 443 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 MICAQ29983 383 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 HIST2H3PS2Q5TEC6 136 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 ZNF770Q6IQ21 691 aaPredicted RBP16.62■□□□□ 0.25
TPM4-208ENST00000588410 HIST2H3AQ71DI3 136 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 TRPM8Q7Z2W7 1104 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 GLCCI1Q86VQ1 547 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 PROKR2Q8NFJ6 384 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 BCAS4Q8TDM0 211 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 HAVCR1Q96D42 359 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 PITX2Q99697 317 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 TSSK6Q9BXA6 273 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 IL20Q9NYY1 176 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 TMEFF2Q9UIK5 374 aaPredicted RBP16.62■□□□□ 0.25
TPM4-208ENST00000588410 KLHL21Q9UJP4 597 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 CACNG2Q9Y698 323 aa16.62■□□□□ 0.25
TPM4-208ENST00000588410 BHLHE40O14503 412 aa16.61■□□□□ 0.25
TPM4-208ENST00000588410 ZNF823P16415 610 aa16.61■□□□□ 0.25
TPM4-208ENST00000588410 KITLGP21583 273 aa16.61■□□□□ 0.25
TPM4-208ENST00000588410 DBPQ10586 325 aaPredicted RBP16.61■□□□□ 0.25
TPM4-208ENST00000588410 TRAP1Q12931 704 aaKnown RBP16.61■□□□□ 0.25
TPM4-208ENST00000588410 LINC00346Q8IVM7 164 aa16.61■□□□□ 0.25
TPM4-208ENST00000588410 OR2T4Q8NH00 348 aa16.61■□□□□ 0.25
TPM4-208ENST00000588410 APOBEC3DQ96AK3 386 aaPredicted RBP16.61■□□□□ 0.25
TPM4-208ENST00000588410 PLA2G12AQ9BZM1 189 aa16.61■□□□□ 0.25
TPM4-208ENST00000588410 LPAR2Q9HBW0 351 aa16.61■□□□□ 0.25
TPM4-208ENST00000588410 PTTG3PQ9NZH4 202 aa16.61■□□□□ 0.25
TPM4-208ENST00000588410 BAIAP2Q9UQB8 552 aa16.61■□□□□ 0.25
TPM4-208ENST00000588410 GYG2O15488 501 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 CD55P08174 381 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 ANPEPP15144 967 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 RAC2P15153 192 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 SRP14P37108 136 aaKnown RBP16.6■□□□□ 0.25
TPM4-208ENST00000588410 ECH1Q13011 328 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 CDK5R2Q13319 367 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 DNAL1Q4LDG9 190 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 SLC18B1Q6NT16 456 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 PEG10Q86TG7 708 aaKnown RBP16.6■□□□□ 0.25
TPM4-208ENST00000588410 CYB561A3Q8NBI2 242 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 OR2Z1Q8NG97 314 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 OR51F2Q8NH61 342 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 RAB39BQ96DA2 213 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 CHID1Q9BWS9 393 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 DGCR6LQ9BY27 220 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 VNN3Q9NY84 501 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 KCNG2Q9UJ96 466 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 WIPI2Q9Y4P8 454 aa16.6■□□□□ 0.25
TPM4-208ENST00000588410 FAM157AC9JC47 383 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 GNGT2O14610 69 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 ACOT8O14734 319 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 SURF4O15260 269 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 SOX14O95416 240 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 CST1P01037 141 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 MSMBP08118 114 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 TNFRSF1AP19438 455 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 PYCR1P32322 319 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 LMO4P61968 165 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 GK3PQ14409 553 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 CFAP77Q6ZQR2 320 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 CXXC5Q7LFL8 322 aaKnown RBP16.59■□□□□ 0.25
TPM4-208ENST00000588410 LNX2Q8N448 690 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 OR2T33Q8NG76 320 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 OR10G2Q8NGC3 310 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 OR8D4Q8NGM9 314 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 TMEM186Q96B77 213 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 ATF6BQ99941 703 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 ZNF665Q9H7R5 613 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 CYB5R1Q9UHQ9 305 aa16.59■□□□□ 0.25
TPM4-208ENST00000588410 CHD3Q12873 2000 aaKnown RBP16.58■□□□□ 0.25
TPM4-208ENST00000588410 ISPDA4D126 451 aa16.58■□□□□ 0.24
TPM4-208ENST00000588410 AQP12BA6NM10 295 aa16.58■□□□□ 0.24
TPM4-208ENST00000588410 RNF212BA8MTL3 300 aa16.58■□□□□ 0.24
TPM4-208ENST00000588410 F5H5K5 113 aa16.58■□□□□ 0.24
TPM4-208ENST00000588410 UBOX5O94941 541 aa16.58■□□□□ 0.24
TPM4-208ENST00000588410 IFNGP01579 166 aa16.58■□□□□ 0.24
TPM4-208ENST00000588410 HOXB6P17509 224 aaKnown RBP16.58■□□□□ 0.24
TPM4-208ENST00000588410 GGT2P36268 569 aa16.58■□□□□ 0.24
TPM4-208ENST00000588410 HLXQ14774 488 aaPredicted RBP16.58■□□□□ 0.24
TPM4-208ENST00000588410 ACSM5Q6NUN0 579 aa16.58■□□□□ 0.24
TPM4-208ENST00000588410 FBXW12Q6X9E4 464 aa16.58■□□□□ 0.24
TPM4-208ENST00000588410 AQP12AQ8IXF9 295 aa16.58■□□□□ 0.24
TPM4-208ENST00000588410 OR5AS1Q8N127 324 aa16.58■□□□□ 0.24
TPM4-208ENST00000588410 ATG16L2Q8NAA4 619 aa16.58■□□□□ 0.24
TPM4-208ENST00000588410 SLC37A3Q8NCC5 494 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms