RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SRA1Q9HD15 236 aaKnown RBP13.05□□□□□ -0.32
CCDC43-203ENST00000588210 LRFN1Q9P244 771 aa13.05□□□□□ -0.32
CCDC43-203ENST00000588210 IKZF2Q9UKS7 526 aa13.05□□□□□ -0.32
CCDC43-203ENST00000588210 CHD6Q8TD26 2715 aa13.05□□□□□ -0.32
CCDC43-203ENST00000588210 TRAV8-7A0A075B6U6 113 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 TRAV17A0A0B4J275 112 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 OR2M5A3KFT3 312 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 TVP23AA6NH52 213 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 B8ZZF3 427 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 H7C1C5 153 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 XRCC3O43542 346 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 C1QL1O75973 258 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 UTS2O95399 124 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 PTHLHP12272 177 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 FAUP35544 74 aaKnown RBP13.04□□□□□ -0.32
CCDC43-203ENST00000588210 RAP2BP61225 183 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 DCAF7P61962 342 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 LCN6P62502 163 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 RASGEF1BQ0VAM2 473 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 PLEKHN1Q494U1 663 aaPredicted RBP13.04□□□□□ -0.32
CCDC43-203ENST00000588210 ZNF468Q5VIY5 522 aaPredicted RBP13.04□□□□□ -0.32
CCDC43-203ENST00000588210 FAAP20Q6NZ36 180 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 OPN5Q6U736 354 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 MEIOBQ8N635 442 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 ZNF441Q8N8Z8 693 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 KTI12Q96EK9 354 aaPredicted RBP13.04□□□□□ -0.32
CCDC43-203ENST00000588210 INTS14Q96SY0 518 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 TMPRSS13Q9BYE2 586 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 CA10Q9NS85 328 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 ZNF69Q9UC07 566 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 STEAP1Q9UHE8 339 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 NUP50Q9UKX7 468 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 ARPC4-TTLL3A0A0A6YYG9 625 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 PLSCR5A0PG75 271 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 ZSCAN5BA6NJL1 495 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 H7C417 338 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 OR2A4O95047 310 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 CFDP00746 253 aaPredicted RBP13.04□□□□□ -0.32
CCDC43-203ENST00000588210 ALDOBP05062 364 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 TMIGD3P0DMS9 266 aaPredicted RBP13.04□□□□□ -0.32
CCDC43-203ENST00000588210 ANXA7P20073 488 aaKnown RBP13.04□□□□□ -0.32
CCDC43-203ENST00000588210 ENPP1P22413 925 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 PPICP45877 212 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 OPCMLQ14982 345 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 OR1C1Q15619 314 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 FDX2Q6P4F2 183 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 GLB1L2Q8IW92 636 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 PRSS35Q8N3Z0 413 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 ZNF676Q8N7Q3 588 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 C4orf45Q96LM5 186 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 SIGLEC12Q96PQ1 595 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 OR2A7Q96R45 310 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 CHIAQ9BZP6 476 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 ADAM19Q9H013 955 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 MTFP1Q9UDX5 166 aa13.04□□□□□ -0.32
CCDC43-203ENST00000588210 CNTRLQ7Z7A1 2325 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 A0A1B0GTH9 108 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 NEURL1O76050 574 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 RRASP10301 218 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 TACR3P29371 465 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 SLC6A8P48029 635 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 NR0B1P51843 470 aaKnown RBP13.03□□□□□ -0.32
CCDC43-203ENST00000588210 RAB14P61106 215 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 SPINK14Q6IE38 97 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 RPUSD3Q6P087 351 aaKnown RBP13.03□□□□□ -0.32
CCDC43-203ENST00000588210 IDO2Q6ZQW0 420 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 Q8NA96 180 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 MDS2Q8NDY4 140 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 OR10AC1Q8NH08 325 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 LRRC20Q8TCA0 184 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 MCHR2Q969V1 340 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 TMEM106AQ96A25 262 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 ZNF524Q96C55 264 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 LAT2Q9GZY6 243 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 NXF5Q9H1B4 397 aaKnown RBP13.03□□□□□ -0.32
CCDC43-203ENST00000588210 NARFLQ9H6Q4 476 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 HPF1Q9NWY4 346 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 TLN1Q9Y490 2541 aaKnown RBP13.03□□□□□ -0.32
CCDC43-203ENST00000588210 COL6A6A6NMZ7 2263 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 FRG2CA6NGY1 282 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 I3L521 148 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 ZNF354AO60765 605 aaPredicted RBP13.03□□□□□ -0.32
CCDC43-203ENST00000588210 MAS1P04201 325 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 HIST1H2ABP04908 130 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 CSF1P09603 554 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 CD46P15529 392 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 KIR3DL2P43630 455 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 PSMA6P60900 246 aaKnown RBP13.03□□□□□ -0.32
CCDC43-203ENST00000588210 RBMS2Q15434 407 aaKnown RBP13.03□□□□□ -0.32
CCDC43-203ENST00000588210 AANATQ16613 207 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 ANKRD16Q6P6B7 361 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 HIST3H2AQ7L7L0 130 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 DPY19L4Q7Z388 723 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 ZNF563Q8TA94 476 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 HIST1H2ACQ93077 130 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 TAAR8Q969N4 342 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 GSX2Q9BZM3 304 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 TAS2R8Q9NYW2 309 aa13.03□□□□□ -0.32
CCDC43-203ENST00000588210 GGT3PA6NGU5 568 aa13.02□□□□□ -0.33
CCDC43-203ENST00000588210 OR6C65A6NJZ3 312 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms