RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ACHEP22303 614 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 HIST1H3AP68431 136 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 GALK2Q01415 458 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 RGS21Q2M5E4 152 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 HIST2H3PS2Q5TEC6 136 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 HIST2H3AQ71DI3 136 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 SPACA3Q8IXA5 215 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 ELMOD2Q8IZ81 293 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 SH3GL3Q99963 347 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 PRDM14Q9GZV8 571 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 V9GY05 133 aa17.46■□□□□ 0.39
TRIM47-204ENST00000587339 TRAV8-7A0A075B6U6 113 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 ZNF181Q2M3W8 571 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 C11orf91Q3C1V1 193 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 TRMT10AQ8TBZ6 339 aaKnown RBP17.45■□□□□ 0.38
TRIM47-204ENST00000587339 GFI1Q99684 422 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 SLC7A10Q9NS82 523 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 PLEK2Q9NYT0 353 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 ABRACLQ9P1F3 81 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 NUFIP1Q9UHK0 495 aaKnown RBP17.45■□□□□ 0.38
TRIM47-204ENST00000587339 A0A1B0GVC2 190 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 IFITM5A6NNB3 132 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 P2RY10O00398 339 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 TGM6O95932 706 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 PAHP00439 452 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 MAS1P04201 325 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 CST2P09228 141 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 ACSM4P0C7M7 580 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 ZNF12P17014 697 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 APEX1P27695 318 aaKnown RBP17.45■□□□□ 0.38
TRIM47-204ENST00000587339 CX3CR1P49238 355 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 EVX1P49640 407 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 ZNF121P58317 390 aaPredicted RBP17.45■□□□□ 0.38
TRIM47-204ENST00000587339 ZNF79Q15937 498 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 ELFN2Q5R3F8 820 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 CNIH2Q6PI25 160 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 LUZP2Q86TE4 346 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 SLC22A24Q8N4F4 322 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 ZNF283Q8N7M2 679 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 SAMD12Q8N8I0 201 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 OR13C3Q8NGS6 347 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 APH1AQ96BI3 265 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 KCNJ15Q99712 375 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 CCDC32Q9BV29 185 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 ZNF175Q9Y473 711 aa17.45■□□□□ 0.38
TRIM47-204ENST00000587339 FAM25AB3EWG3 89 aa17.44■□□□□ 0.38
TRIM47-204ENST00000587339 FAM25CB3EWG5 89 aa17.44■□□□□ 0.38
TRIM47-204ENST00000587339 FAM25GB3EWG6 89 aa17.44■□□□□ 0.38
TRIM47-204ENST00000587339 AIPO00170 330 aa17.44■□□□□ 0.38
TRIM47-204ENST00000587339 AQP7O14520 342 aa17.44■□□□□ 0.38
TRIM47-204ENST00000587339 PDGFAP04085 211 aa17.44■□□□□ 0.38
TRIM47-204ENST00000587339 FCGR2AP12318 317 aa17.44■□□□□ 0.38
TRIM47-204ENST00000587339 CTSSP25774 331 aa17.44■□□□□ 0.38
TRIM47-204ENST00000587339 CCDC92Q53HC0 331 aaPredicted RBP17.44■□□□□ 0.38
TRIM47-204ENST00000587339 Q6ZS92 163 aa17.44■□□□□ 0.38
TRIM47-204ENST00000587339 LRRTM1Q86UE6 522 aa17.44■□□□□ 0.38
TRIM47-204ENST00000587339 TAAR6Q96RI8 345 aa17.44■□□□□ 0.38
TRIM47-204ENST00000587339 SDHCQ99643 169 aaPredicted RBP17.44■□□□□ 0.38
TRIM47-204ENST00000587339 CKLFQ9UBR5 152 aa17.44■□□□□ 0.38
TRIM47-204ENST00000587339 N6AMT1Q9Y5N5 214 aa17.44■□□□□ 0.38
TRIM47-204ENST00000587339 ANXA2P2A6NMY6 339 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 ANXA2P07355 339 aaKnown RBP17.43■□□□□ 0.38
TRIM47-204ENST00000587339 SLC2A1P11166 492 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 ADRA2CP18825 462 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 ELK1P19419 428 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 PSMD7P51665 324 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 LRRC28Q86X40 367 aaPredicted RBP17.43■□□□□ 0.38
TRIM47-204ENST00000587339 ZNF671Q8TAW3 534 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 TNRC6AQ8NDV7 1962 aaKnown RBP17.43■□□□□ 0.38
TRIM47-204ENST00000587339 ZNF587BE7ETH6 402 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 MKRN2OSH3BPM6 223 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 TMEM127O75204 238 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 WISP2O76076 250 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 SNRPBP14678 240 aaKnown RBP17.43■□□□□ 0.38
TRIM47-204ENST00000587339 EIF2S3P41091 472 aaKnown RBP17.43■□□□□ 0.38
TRIM47-204ENST00000587339 SCRN3Q0VDG4 424 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 NRN1LQ496H8 165 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 HES5Q5TA89 166 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 XKRXQ6PP77 449 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 ZNF813Q6ZN06 617 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 LYSMD2Q8IV50 215 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 ZNF100Q8IYN0 542 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 SRRQ9GZT4 340 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 GP6Q9HCN6 339 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 UPB1Q9UBR1 384 aa17.43■□□□□ 0.38
TRIM47-204ENST00000587339 F5H5K5 113 aa17.42■□□□□ 0.38
TRIM47-204ENST00000587339 RPL36A-HNRNPH2H7BZ11 118 aa17.42■□□□□ 0.38
TRIM47-204ENST00000587339 SGCEO43556 437 aa17.42■□□□□ 0.38
TRIM47-204ENST00000587339 SYT7O43581 403 aa17.42■□□□□ 0.38
TRIM47-204ENST00000587339 FARS2O95363 451 aaKnown RBP17.42■□□□□ 0.38
TRIM47-204ENST00000587339 AZGP1P25311 298 aaKnown RBP17.42■□□□□ 0.38
TRIM47-204ENST00000587339 STEAP3Q658P3 488 aa17.42■□□□□ 0.38
TRIM47-204ENST00000587339 METAP1DQ6UB28 335 aaPredicted RBP17.42■□□□□ 0.38
TRIM47-204ENST00000587339 SLC16A14Q7RTX9 510 aa17.42■□□□□ 0.38
TRIM47-204ENST00000587339 NUFIP2Q7Z417 695 aaKnown RBP17.42■□□□□ 0.38
TRIM47-204ENST00000587339 P4HA3Q7Z4N8 544 aa17.42■□□□□ 0.38
TRIM47-204ENST00000587339 SIAH3Q8IW03 269 aa17.42■□□□□ 0.38
TRIM47-204ENST00000587339 DNAAF1Q8NEP3 725 aa17.42■□□□□ 0.38
TRIM47-204ENST00000587339 SARAFQ96BY9 339 aa17.42■□□□□ 0.38
TRIM47-204ENST00000587339 HDHD2Q9H0R4 259 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms