RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 ACTR3BQ9P1U1 418 aa11.16□□□□□ -0.62
H3F3B-205ENST00000587171 LYVE1Q9Y5Y7 322 aa11.16□□□□□ -0.62
H3F3B-205ENST00000587171 NBEAL1Q6ZS30 2694 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 KRT36O76013 467 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 RENP00797 406 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 RAC2P15153 192 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 NOS3P29474 1203 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 MAGEA2P43356 314 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 CENPAP49450 140 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 ERFP50548 548 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 TNFAIP6P98066 277 aaPredicted RBP11.15□□□□□ -0.62
H3F3B-205ENST00000587171 DBPQ10586 325 aaPredicted RBP11.15□□□□□ -0.62
H3F3B-205ENST00000587171 CORO6Q6QEF8 472 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 CYP2R1Q6VVX0 501 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 FBXW12Q6X9E4 464 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 SDR9C7Q8NEX9 313 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 GNPDA2Q8TDQ7 276 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 PTP4A1Q93096 173 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 CCT8L2Q96SF2 557 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 COQ7Q99807 217 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 BTBD10Q9BSF8 475 aa11.15□□□□□ -0.62
H3F3B-205ENST00000587171 REPIN1Q9BWE0 567 aaKnown RBP11.15□□□□□ -0.62
H3F3B-205ENST00000587171 SRA1Q9HD15 236 aaKnown RBP11.15□□□□□ -0.62
H3F3B-205ENST00000587171 RPRD1BQ9NQG5 326 aaKnown RBP11.15□□□□□ -0.62
H3F3B-205ENST00000587171 TCRBV5S2A0A599 114 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 OR6C68A6NDL8 312 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 B2RBV5 119 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 TCF21O43680 179 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 PLPP2O43688 288 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 PNPP00491 289 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 TNFSF4P23510 183 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 HLXQ14774 488 aaPredicted RBP11.14□□□□□ -0.63
H3F3B-205ENST00000587171 RSPO1Q2MKA7 263 aaPredicted RBP11.14□□□□□ -0.63
H3F3B-205ENST00000587171 KRTAP27-1Q3LI81 207 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 LIPNQ5VXI9 398 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 ZNF770Q6IQ21 691 aaPredicted RBP11.14□□□□□ -0.63
H3F3B-205ENST00000587171 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.14□□□□□ -0.63
H3F3B-205ENST00000587171 ARHGAP24Q8N264 748 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 LINC00471Q8N535 108 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 OR2Z1Q8NG97 314 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 OR9Q2Q8NGE9 314 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 OR4C15Q8NGM1 316 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 APOBEC3DQ96AK3 386 aaPredicted RBP11.14□□□□□ -0.63
H3F3B-205ENST00000587171 GAL3ST1Q99999 423 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 C19orf24Q9BVV8 132 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 TRIM15Q9C019 465 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 EGLN3Q9H6Z9 239 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 DCAF16Q9NXF7 216 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 IL19Q9UHD0 177 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 METRNQ9UJH8 293 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 CDH10Q9Y6N8 788 aa11.14□□□□□ -0.63
H3F3B-205ENST00000587171 ISPDA4D126 451 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 TNFRSF11BO00300 401 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 BHLHE40O14503 412 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 IGHV2-70P01814 119 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 TNFRSF1AP19438 455 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 GGT2P36268 569 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 HNRNPA0Q13151 305 aaKnown RBP11.13□□□□□ -0.63
H3F3B-205ENST00000587171 SLC36A3Q495N2 470 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 CLEC12AQ5QGZ9 265 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 SLC35F1Q5T1Q4 408 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 LCN8Q6JVE9 175 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 SLC18B1Q6NT16 456 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 RPL13AP3Q6NVV1 102 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 FAHD2BQ6P2I3 314 aaPredicted RBP11.13□□□□□ -0.63
H3F3B-205ENST00000587171 SHQ1Q6PI26 577 aaKnown RBP11.13□□□□□ -0.63
H3F3B-205ENST00000587171 CFAP77Q6ZQR2 320 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 COLCA1Q6ZS62 124 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 C1orf229Q6ZS94 237 aaPredicted RBP11.13□□□□□ -0.63
H3F3B-205ENST00000587171 PEG10Q86TG7 708 aaKnown RBP11.13□□□□□ -0.63
H3F3B-205ENST00000587171 LINC00346Q8IVM7 164 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 ZNF283Q8N7M2 679 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 OR52L1Q8NGH7 329 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 OR52E2Q8NGJ4 325 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 OR5L1Q8NGL2 311 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 ITLN1Q8WWA0 313 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 FAHD2AQ96GK7 314 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 NSL1Q96IY1 281 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 DDOQ99489 341 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 PLA2G12AQ9BZM1 189 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 MUC13Q9H3R2 512 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 FN3KQ9H479 309 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 MAGIXQ9H6Y5 334 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 METTL17Q9H7H0 456 aaPredicted RBP11.13□□□□□ -0.63
H3F3B-205ENST00000587171 TMEM106BQ9NUM4 274 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 IL20Q9NYY1 176 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 PTTG3PQ9NZH4 202 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 CYB5R1Q9UHQ9 305 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 NPTNQ9Y639 398 aa11.13□□□□□ -0.63
H3F3B-205ENST00000587171 A0A0G2JMP0 313 aa11.12□□□□□ -0.63
H3F3B-205ENST00000587171 A0A0X1KG70 313 aa11.12□□□□□ -0.63
H3F3B-205ENST00000587171 SURF4O15260 269 aa11.12□□□□□ -0.63
H3F3B-205ENST00000587171 FAM107AO95990 144 aa11.12□□□□□ -0.63
H3F3B-205ENST00000587171 AVPP01185 164 aa11.12□□□□□ -0.63
H3F3B-205ENST00000587171 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.12□□□□□ -0.63
H3F3B-205ENST00000587171 ECH1Q13011 328 aa11.12□□□□□ -0.63
H3F3B-205ENST00000587171 TRIM25Q14258 630 aaKnown RBP11.12□□□□□ -0.63
H3F3B-205ENST00000587171 ZNF362Q5T0B9 420 aaPredicted RBP11.12□□□□□ -0.63
H3F3B-205ENST00000587171 OR2T2Q6IF00 324 aa11.12□□□□□ -0.63
H3F3B-205ENST00000587171 RASSF6Q6ZTQ3 369 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms