RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ZNF544Q6NX49 715 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 LINGO2Q7L985 606 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 FNDC9Q8TBE3 224 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 ACOT12Q8WYK0 555 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 WBP1Q96G27 269 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 WDYHV1Q96HA8 205 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 GPR137Q96N19 417 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 GFI1Q99684 422 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 FAM206AQ9NX38 181 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 GTF2A1LQ9UNN4 478 aa17.99■□□□□ 0.47
ATG4D-204ENST00000586417 NCOA6Q14686 2063 aaPredicted RBP17.99■□□□□ 0.47
ATG4D-204ENST00000586417 ZNF878C9JN71 531 aa17.98■□□□□ 0.47
ATG4D-204ENST00000586417 LOC110117498-PIK3R3F6TDL0 507 aa17.98■□□□□ 0.47
ATG4D-204ENST00000586417 CPN1P15169 458 aa17.98■□□□□ 0.47
ATG4D-204ENST00000586417 ZNF84P51523 738 aa17.98■□□□□ 0.47
ATG4D-204ENST00000586417 TDGF1P3P51864 188 aa17.98■□□□□ 0.47
ATG4D-204ENST00000586417 PPP3R1P63098 170 aa17.98■□□□□ 0.47
ATG4D-204ENST00000586417 MRPS34P82930 218 aaKnown RBP17.98■□□□□ 0.47
ATG4D-204ENST00000586417 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.98■□□□□ 0.47
ATG4D-204ENST00000586417 KCTD12Q96CX2 325 aaKnown RBP17.98■□□□□ 0.47
ATG4D-204ENST00000586417 SDHCQ99643 169 aaPredicted RBP17.98■□□□□ 0.47
ATG4D-204ENST00000586417 OR52A1Q9UKL2 312 aa17.98■□□□□ 0.47
ATG4D-204ENST00000586417 MCTS1Q9ULC4 181 aaKnown RBP17.98■□□□□ 0.47
ATG4D-204ENST00000586417 ZGRF1Q86YA3 2104 aa17.98■□□□□ 0.47
ATG4D-204ENST00000586417 COL6A6A6NMZ7 2263 aa17.97■□□□□ 0.47
ATG4D-204ENST00000586417 TMEM269A0A1B0GVZ9 245 aa17.97■□□□□ 0.47
ATG4D-204ENST00000586417 TTLL8A6PVC2 850 aa17.97■□□□□ 0.47
ATG4D-204ENST00000586417 NOTOA8MTQ0 251 aa17.97■□□□□ 0.47
ATG4D-204ENST00000586417 AQP7O14520 342 aa17.97■□□□□ 0.47
ATG4D-204ENST00000586417 RIPPLY2Q5TAB7 128 aa17.97■□□□□ 0.47
ATG4D-204ENST00000586417 ALKBH3Q96Q83 286 aaPredicted RBP17.97■□□□□ 0.47
ATG4D-204ENST00000586417 CRLF2Q9HC73 371 aa17.97■□□□□ 0.47
ATG4D-204ENST00000586417 DAPK2Q9UIK4 370 aa17.97■□□□□ 0.47
ATG4D-204ENST00000586417 AK6Q9Y3D8 172 aaKnown RBP17.97■□□□□ 0.47
ATG4D-204ENST00000586417 H3BSH0 61 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 HPGDSO60760 199 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 RAF1P04049 648 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 SLC2A2P11168 524 aaPredicted RBP17.96■□□□□ 0.47
ATG4D-204ENST00000586417 EPXP11678 715 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 GUCA1AP43080 201 aaPredicted RBP17.96■□□□□ 0.47
ATG4D-204ENST00000586417 HIST1H3AP68431 136 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 HIST2H3PS2Q5TEC6 136 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 MZT2AQ6P582 158 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 HIST2H3AQ71DI3 136 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 GPR137CQ8N3F9 429 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 CPT1CQ8TCG5 803 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 TMEM106AQ96A25 262 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 SLX1AQ9BQ83 275 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 ARPC4-TTLL3A0A0A6YYG9 625 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 UPK1BO75841 260 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 ISG15P05161 165 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 ATF1P18846 271 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 ZNF79Q15937 498 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 FAM27BQ5VT28 67 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.96■□□□□ 0.47
ATG4D-204ENST00000586417 RNF122Q9H9V4 155 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 BCO1Q9HAY6 547 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 DDX28Q9NUL7 540 aaKnown RBP17.96■□□□□ 0.47
ATG4D-204ENST00000586417 CAMK2AQ9UQM7 478 aa17.96■□□□□ 0.47
ATG4D-204ENST00000586417 NOSIPQ9Y314 301 aaKnown RBP17.96■□□□□ 0.47
ATG4D-204ENST00000586417 ADRA2CP18825 462 aa17.95■□□□□ 0.46
ATG4D-204ENST00000586417 APEX1P27695 318 aaKnown RBP17.95■□□□□ 0.46
ATG4D-204ENST00000586417 PSMA6P60900 246 aaKnown RBP17.95■□□□□ 0.46
ATG4D-204ENST00000586417 KRTCAP3Q53RY4 240 aa17.95■□□□□ 0.46
ATG4D-204ENST00000586417 KLHL24Q6TFL4 600 aa17.95■□□□□ 0.46
ATG4D-204ENST00000586417 STAC2Q6ZMT1 411 aa17.95■□□□□ 0.46
ATG4D-204ENST00000586417 LRRTM1Q86UE6 522 aa17.95■□□□□ 0.46
ATG4D-204ENST00000586417 TUSC5Q8IXB3 177 aa17.95■□□□□ 0.46
ATG4D-204ENST00000586417 OR5M9Q8NGP3 310 aa17.95■□□□□ 0.46
ATG4D-204ENST00000586417 THRSPQ92748 146 aa17.95■□□□□ 0.46
ATG4D-204ENST00000586417 DIRAS2Q96HU8 199 aa17.95■□□□□ 0.46
ATG4D-204ENST00000586417 NIPAL2Q9H841 368 aa17.95■□□□□ 0.46
ATG4D-204ENST00000586417 TMEM38BQ9NVV0 291 aa17.95■□□□□ 0.46
ATG4D-204ENST00000586417 EMC3Q9P0I2 261 aa17.95■□□□□ 0.46
ATG4D-204ENST00000586417 SHANK1Q9Y566 2161 aa17.95■□□□□ 0.46
ATG4D-204ENST00000586417 TRAV8-7A0A075B6U6 113 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 ANKRD61A6NGH8 418 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 ZNF724A8MTY0 619 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 TBX1O43435 398 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 ACHEP22303 614 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 BCL2L15Q5TBC7 163 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 ASPHD2Q6ICH7 369 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 LRRC18Q8N456 261 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 TSEN15Q8WW01 171 aaKnown RBP17.94■□□□□ 0.46
ATG4D-204ENST00000586417 ASB5Q8WWX0 329 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 SOSTQ9BQB4 213 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 GPR35Q9HC97 309 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 NBASA2RRP1 2371 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 LOC107986453A0A1B0GWG9 222 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 PDCD5O14737 125 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 DOK2O60496 412 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 MRPL33O75394 65 aaKnown RBP17.94■□□□□ 0.46
ATG4D-204ENST00000586417 TTRP02766 147 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 NPR2P20594 1047 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 TSPO2Q5TGU0 170 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 ZNF704Q6ZNC4 412 aaPredicted RBP17.94■□□□□ 0.46
ATG4D-204ENST00000586417 ELMOD2Q8IZ81 293 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 GJC3Q8NFK1 279 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 FBXO17Q96EF6 278 aa17.94■□□□□ 0.46
ATG4D-204ENST00000586417 PRRG4Q9BZD6 226 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms