RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 HOXA4Q00056 320 aaPredicted RBP9.75□□□□□ -0.85
LIG3-207ENST00000586119 MS4A2Q01362 244 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 PAX8Q06710 450 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 DBPQ10586 325 aaPredicted RBP9.75□□□□□ -0.85
LIG3-207ENST00000586119 HLXQ14774 488 aaPredicted RBP9.75□□□□□ -0.85
LIG3-207ENST00000586119 FAM201AQ5SY85 155 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 LEG1Q6P5S2 330 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 TBPL2Q6SJ96 375 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 TREML4Q6UXN2 200 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 FKBP9P1Q75LS8 142 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 AQP12AQ8IXF9 295 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 ALDH16A1Q8IZ83 802 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 CCDC124Q96CT7 223 aaKnown RBP9.75□□□□□ -0.85
LIG3-207ENST00000586119 BPIFA2Q96DR5 249 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 PYURFQ96I23 114 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 TPD52L3Q96J77 140 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 CLPTM1LQ96KA5 538 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 SAMD8Q96LT4 415 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 MAGIXQ9H6Y5 334 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 ELOVL3Q9HB03 270 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 POLE4Q9NR33 117 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 MAN2C1Q9NTJ4 1040 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 POMPQ9Y244 141 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 TGP01266 2768 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 WNK1Q9H4A3 2382 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 NPIPB13A6NJU9 1138 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 CEACAM18A8MTB9 384 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 NPIPB4C9JG80 1138 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 TMEM178BH3BS89 294 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 FFAR1O14842 300 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 CIB2O75838 187 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 CYB5R3P00387 301 aaPredicted RBP9.74□□□□□ -0.85
LIG3-207ENST00000586119 IGF2P01344 180 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 IFNW1P05000 195 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 RNASE1P07998 156 aaKnown RBP9.74□□□□□ -0.85
LIG3-207ENST00000586119 DBHP09172 617 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 SELEP16581 610 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 KITLGP21583 273 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 MSR1P21757 451 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 IFNA8P32881 189 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 PMELP40967 661 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 HTR5AP47898 357 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 PRSS12P56730 875 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 PAX2Q02962 417 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 FLOT2Q14254 428 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 TMEM155Q4W5P6 130 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 PDLIM3Q53GG5 364 aaPredicted RBP9.74□□□□□ -0.85
LIG3-207ENST00000586119 HDDC2Q7Z4H3 204 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 VTCN1Q7Z7D3 282 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 NRMQ8IXM6 262 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 KLHL36Q8N4N3 616 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 SPICQ8N5J4 248 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 OR13C2Q8NGS9 318 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 HAVCR1Q96D42 359 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 HSH2DQ96JZ2 352 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 Q96M85 177 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 RAB3IPQ96QF0 476 aaPredicted RBP9.74□□□□□ -0.85
LIG3-207ENST00000586119 OR2V2Q96R30 315 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 DIRC2Q96SL1 478 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 MS4A7Q9GZW8 240 aaPredicted RBP9.74□□□□□ -0.85
LIG3-207ENST00000586119 TMEM165Q9HC07 324 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 TNFRSF19Q9NS68 423 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 TBCCD1Q9NVR7 557 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 STX18Q9P2W9 335 aaKnown RBP9.74□□□□□ -0.85
LIG3-207ENST00000586119 PPP1R3CQ9UQK1 317 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 ADAM18Q9Y3Q7 739 aa9.74□□□□□ -0.85
LIG3-207ENST00000586119 TCRBV5S2A0A599 114 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 C12orf71A8MTZ7 269 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 A8MXK9 166 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 CDC42EP2O14613 210 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 DOK2O60496 412 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 ATP6V1B2P21281 511 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 MMP16P51512 607 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 PCBD1P61457 104 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 CCDC92Q53HC0 331 aaPredicted RBP9.73□□□□□ -0.85
LIG3-207ENST00000586119 OR2T2Q6IF00 324 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 UNQ6126/PRO20091Q6UXV3 157 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 CYP2R1Q6VVX0 501 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 VASH1Q7L8A9 365 aaPredicted RBP9.73□□□□□ -0.85
LIG3-207ENST00000586119 CYP4Z1Q86W10 505 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 PARP8Q8N3A8 854 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 ATG16L2Q8NAA4 619 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 C19orf18Q8NEA5 215 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 OR52E2Q8NGJ4 325 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 GPA33Q99795 319 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 MRI1Q9BV20 369 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 GCM1Q9NP62 436 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 PTTG3PQ9NZH4 202 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 IL19Q9UHD0 177 aa9.73□□□□□ -0.85
LIG3-207ENST00000586119 A0A087WUU8 490 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 EFCAB9A8MZ26 197 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 H3BSA7 217 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 SGCEO43556 437 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 SEMG1P04279 462 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 CTLA4P16410 223 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 TNFRSF1AP19438 455 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 GSTM3P21266 225 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 GUCA1AP43080 201 aaPredicted RBP9.72□□□□□ -0.85
LIG3-207ENST00000586119 GPR4P46093 362 aa9.72□□□□□ -0.85
LIG3-207ENST00000586119 PRKCDQ05655 676 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms