RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 PHF3Q92576 2039 aaKnown RBP10□□□□□ -0.81
LIG3-204ENST00000585740 DSPP15924 2871 aaKnown RBP10□□□□□ -0.81
LIG3-204ENST00000585740 NBEAQ8NFP9 2946 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 A0A087WV48 116 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 A0A1W2PNU3 283 aaPredicted RBP9.99□□□□□ -0.81
LIG3-204ENST00000585740 PMS2P1A4D2B8 440 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 LRRC3CA6NJW4 275 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 TNFSF11O14788 317 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 TFECO14948 347 aaPredicted RBP9.99□□□□□ -0.81
LIG3-204ENST00000585740 KRT33AO76009 404 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 TNFSF15O95150 251 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 WNT11O96014 354 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 APOC1P02654 83 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 CD37P11049 281 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 MSR1P21757 451 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 SLC6A1P30531 599 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 TRIP6Q15654 476 aaKnown RBP9.99□□□□□ -0.81
LIG3-204ENST00000585740 TMEM69Q5SWH9 247 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 OTPQ5XKR4 325 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 LINGO2Q7L985 606 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 PIP4P1Q86T03 277 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 CCDC54Q8NEL0 328 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 OR6M1Q8NGM8 313 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 OR2V1Q8NHB1 315 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 ADAMTS17Q8TE56 1095 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 PSMF1Q92530 271 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 OR2M2Q96R28 347 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 UTP23Q9BRU9 249 aaKnown RBP9.99□□□□□ -0.81
LIG3-204ENST00000585740 MOV10Q9HCE1 1003 aaKnown RBP9.99□□□□□ -0.81
LIG3-204ENST00000585740 DIABLOQ9NR28 239 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 FAM206AQ9NX38 181 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 LRFN1Q9P244 771 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 NLKQ9UBE8 527 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 NUFIP1Q9UHK0 495 aaKnown RBP9.99□□□□□ -0.81
LIG3-204ENST00000585740 FBXL3Q9UKT7 428 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 RCE1Q9Y256 329 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 NUBP2Q9Y5Y2 271 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 LHFPL6Q9Y693 200 aa9.99□□□□□ -0.81
LIG3-204ENST00000585740 PCNX2A6NKB5 2137 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 DMXL2Q8TDJ6 3036 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 A0A0A6YYH2 397 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 LOC100289279A0A1B0GTE1 492 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 LOC101059948A0A1B0GTJ6 334 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 A0A1B0GVC2 190 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 A0A1B0GVI7 797 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 A6NIN4 97 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 A6NJ64 397 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 INMT-MINDY4F8WBC2 141 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 ACOT7O00154 380 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 EIF1AYO14602 144 aaKnown RBP9.98□□□□□ -0.81
LIG3-204ENST00000585740 DHHO43323 396 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 XRCC3O43542 346 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 LANCL1O43813 399 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 RAMP1O60894 148 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 DHFRP00374 187 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 CTSSP25774 331 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 GDF1P27539 372 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 DDOSTP39656 456 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 GDNFP39905 211 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 RAG2P55895 527 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 CLDN6P56747 220 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 CLDN12P56749 244 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 CARD18P57730 90 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 RAB25P57735 213 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 DGCR2P98153 550 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 SLC36A2Q495M3 483 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 PLA1AQ53H76 456 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 DCAF10Q5QP82 559 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 FAM166AQ6J272 317 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 CORO6Q6QEF8 472 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 KRT74Q7RTS7 529 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 LUZP2Q86TE4 346 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 YRDCQ86U90 279 aaKnown RBP9.98□□□□□ -0.81
LIG3-204ENST00000585740 UBE2J2Q8N2K1 259 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 ZBTB8BQ8NAP8 495 aaPredicted RBP9.98□□□□□ -0.81
LIG3-204ENST00000585740 GJC3Q8NFK1 279 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 FCAMRQ8WWV6 532 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 PHF21AQ96BD5 680 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 PBOV1Q9GZY1 135 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 NELFAQ9H3P2 528 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 EMC7Q9NPA0 242 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 TAS2R4Q9NYW5 299 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 AKAP13Q12802 2813 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 GCN1Q92616 2671 aaKnown RBP9.98□□□□□ -0.81
LIG3-204ENST00000585740 PCSK5Q92824 1860 aa9.98□□□□□ -0.81
LIG3-204ENST00000585740 NCKAP5O14513 1909 aa9.97□□□□□ -0.81
LIG3-204ENST00000585740 KNTC1P50748 2209 aa9.97□□□□□ -0.81
LIG3-204ENST00000585740 A0A0G2JMM0 328 aa9.97□□□□□ -0.81
LIG3-204ENST00000585740 A0A1W2PPB8 328 aa9.97□□□□□ -0.81
LIG3-204ENST00000585740 A0A1W2PRS3 328 aa9.97□□□□□ -0.81
LIG3-204ENST00000585740 KIR3DP1A8MWS1 328 aa9.97□□□□□ -0.81
LIG3-204ENST00000585740 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.97□□□□□ -0.81
LIG3-204ENST00000585740 MASP2O00187 686 aa9.97□□□□□ -0.81
LIG3-204ENST00000585740 P2RY10O00398 339 aa9.97□□□□□ -0.81
LIG3-204ENST00000585740 SYT7O43581 403 aa9.97□□□□□ -0.81
LIG3-204ENST00000585740 TRAPPC6AO75865 159 aa9.97□□□□□ -0.81
LIG3-204ENST00000585740 GLSO94925 669 aaPredicted RBP9.97□□□□□ -0.81
LIG3-204ENST00000585740 ERCC1P07992 297 aaPredicted RBP9.97□□□□□ -0.81
LIG3-204ENST00000585740 CD3GP09693 182 aa9.97□□□□□ -0.81
LIG3-204ENST00000585740 ACSM4P0C7M7 580 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms