RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 CORO6Q6QEF8 472 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 CFAP77Q6ZQR2 320 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 MDP1Q86V88 176 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 SPARTQ8N0X7 666 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 CCDC54Q8NEL0 328 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 OR52H1Q8NGJ2 320 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 OR5L1Q8NGL2 311 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 SSC4DQ8WTU2 575 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 MAP6Q96JE9 813 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 RADILQ96JH8 1075 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 C4orf36Q96KX1 117 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 DACH2Q96NX9 599 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 OPA3Q9H6K4 179 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 ESRP2Q9H6T0 727 aaKnown RBP11.28□□□□□ -0.6
TRIM47-202ENST00000585333 CDH20Q9HBT6 801 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 PAK1IP1Q9NWT1 392 aaPredicted RBP11.28□□□□□ -0.6
TRIM47-202ENST00000585333 BABAM2Q9NXR7 383 aa11.28□□□□□ -0.6
TRIM47-202ENST00000585333 NBASA2RRP1 2371 aa11.27□□□□□ -0.6
TRIM47-202ENST00000585333 VSTM5A8MXK1 200 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 J3QLW9 94 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 M0R135 149 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 CRYAAP02489 173 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 SCG5P05408 212 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 HTR1AP08908 422 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 ZNF12P17014 697 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 ZNF19P17023 458 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 CD53P19397 219 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 PSMA1P25786 263 aaKnown RBP11.27□□□□□ -0.61
TRIM47-202ENST00000585333 OTX1P32242 354 aaPredicted RBP11.27□□□□□ -0.61
TRIM47-202ENST00000585333 ETV1P50549 477 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 NR1H2P55055 460 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 PSMA6P60900 246 aaKnown RBP11.27□□□□□ -0.61
TRIM47-202ENST00000585333 GALK2Q01415 458 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 PIGFQ07326 219 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 MED22Q15528 200 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 TRAM1Q15629 374 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 TAB1Q15750 504 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 CCDC92Q53HC0 331 aaPredicted RBP11.27□□□□□ -0.61
TRIM47-202ENST00000585333 UBE2UQ5VVX9 321 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 ZNF774Q6NX45 483 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 RPL22L1Q6P5R6 122 aaKnown RBP11.27□□□□□ -0.61
TRIM47-202ENST00000585333 SEZ6L2Q6UXD5 910 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 ZNF283Q8N7M2 679 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 WDR31Q8NA23 367 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 SLC30A7Q8NEW0 376 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 ZNF799Q96GE5 643 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 COMMD4Q9H0A8 199 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 WNT5BQ9H1J7 359 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 RGCCQ9H4X1 137 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 ACOT13Q9NPJ3 140 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 ZNF224Q9NZL3 707 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 COPS3Q9UNS2 423 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 LRP12Q9Y561 859 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 R4GMQ9 66 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 FREM1Q5H8C1 2179 aa11.27□□□□□ -0.61
TRIM47-202ENST00000585333 TMEM269A0A1B0GVZ9 245 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 NKX2-6A6NCS4 301 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 WIPF3A6NGB9 483 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 TRIM64CA6NLI5 447 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 LOC110117498-PIK3R3F6TDL0 507 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 IGLV1-44P01699 117 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 CD1AP06126 327 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 PLA2G2AP14555 144 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 ZNF14P17017 642 aaPredicted RBP11.26□□□□□ -0.61
TRIM47-202ENST00000585333 PCSK6P29122 969 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 RPS27P42677 84 aaKnown RBP11.26□□□□□ -0.61
TRIM47-202ENST00000585333 SLC6A9P48067 706 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 IDH3GP51553 393 aaPredicted RBP11.26□□□□□ -0.61
TRIM47-202ENST00000585333 CCR9P51686 369 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 RPS23P62266 143 aaKnown RBP11.26□□□□□ -0.61
TRIM47-202ENST00000585333 EMX1Q04741 257 aaPredicted RBP11.26□□□□□ -0.61
TRIM47-202ENST00000585333 MLLT11Q13015 90 aaPredicted RBP11.26□□□□□ -0.61
TRIM47-202ENST00000585333 MALLQ13021 153 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 ZNF684Q5T5D7 378 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 LIPNQ5VXI9 398 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 FDX2Q6P4F2 183 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 LRRN1Q6UXK5 716 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 ZNF704Q6ZNC4 412 aaPredicted RBP11.26□□□□□ -0.61
TRIM47-202ENST00000585333 UFD1Q92890 307 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 APOBEC3DQ96AK3 386 aaPredicted RBP11.26□□□□□ -0.61
TRIM47-202ENST00000585333 DOK1Q99704 481 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 RHNO1Q9BSD3 238 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 BCL2L14Q9BZR8 327 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 PNRC2Q9NPJ4 139 aaKnown RBP11.26□□□□□ -0.61
TRIM47-202ENST00000585333 TBCCD1Q9NVR7 557 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 SLCO1C1Q9NYB5 712 aa11.26□□□□□ -0.61
TRIM47-202ENST00000585333 MRM2Q9UI43 246 aaKnown RBP11.26□□□□□ -0.61
TRIM47-202ENST00000585333 TMEM212A6NML5 194 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 F5H5K5 113 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 H3BSA7 217 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 XRCC2O43543 280 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 GPRIN2O60269 458 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 ICMTO60725 284 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 ABHD16AO95870 558 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 UBCP0CG48 685 aaKnown RBP11.25□□□□□ -0.61
TRIM47-202ENST00000585333 ATP6V1B1P15313 513 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 JUNBP17275 347 aaPredicted RBP11.25□□□□□ -0.61
TRIM47-202ENST00000585333 CRYGSP22914 178 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 CCKARP32238 428 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 RAD52P43351 418 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms