RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 BGLAPP02818 100 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 CD37P11049 281 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 APOBEC1P41238 236 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 CCL11P51671 97 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 CAPZA1P52907 286 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 GPR85P60893 370 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 FOXK1P85037 733 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 PUDPQ08623 228 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 OR1C1Q15619 314 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 DEFB109BQ30KR1 87 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 SLC25A53Q5H9E4 307 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 TEX30Q5JUR7 227 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 C1QL3Q5VWW1 255 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 ZNF248Q8NDW4 579 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 DNAAF1Q8NEP3 725 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 POC1BQ8TC44 478 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 THEM6Q8WUY1 208 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 TMEM106AQ96A25 262 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 MRGPRX4Q96LA9 322 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 DEPPQ9NTK1 212 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 GLTPQ9NZD2 209 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 IKZF2Q9UKS7 526 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 ZNF346Q9UL40 294 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 KLHDC2Q9Y2U9 406 aa13.36□□□□□ -0.27
CDK5RAP3-236ENST00000584991 AKAP13Q12802 2813 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 FREM3P0C091 2139 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 A8MVM7 634 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 ARPC1BO15143 372 aaKnown RBP13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 F13BP05160 661 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 MELTFP08582 738 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 ROM1Q03395 351 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 SGCBQ16585 318 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 GXYLT1Q4G148 440 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 SIGIRRQ6IA17 410 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 KCTD18Q6PI47 426 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 OR5M1Q8NGP8 315 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 OR6N2Q8NGY6 317 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 OR6S1Q8NH40 331 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 C4orf45Q96LM5 186 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 TSSK2Q96PF2 358 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 OR8B4Q96RC9 309 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 GSX2Q9BZM3 304 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 OR11A1Q9GZK7 315 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 ALX4Q9H161 411 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 OR10A4Q9H209 315 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 ZNF552Q9H707 407 aaPredicted RBP13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 NKIRAS2Q9NYR9 191 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 KIF25Q9UIL4 384 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 NCKAP5O14513 1909 aa13.35□□□□□ -0.27
CDK5RAP3-236ENST00000584991 PLSCR5A0PG75 271 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 UBE2QL1A1L167 161 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 HMSDA8MTL9 139 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 G3V3Q6 166 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 M0R233 179 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 EFNA2O43921 213 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 NPIPB7O75200 414 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 IGHMP01871 453 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 IL11P20809 199 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 CNR1P21554 472 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 EXOSC2Q13868 293 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 C1orf140Q5VVS0 124 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 IDO2Q6ZQW0 420 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 DPY19L4Q7Z388 723 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 CDH26Q8IXH8 852 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 ZNF679Q8IYX0 411 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 ZNF454Q8N9F8 522 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 STK35Q8TDR2 534 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 VSX1Q9NZR4 365 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 ZNF107Q9UII5 783 aaPredicted RBP13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 NUP50Q9UKX7 468 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 MSRB2Q9Y3D2 182 aa13.34□□□□□ -0.27
CDK5RAP3-236ENST00000584991 A0A0A6YYH2 397 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 GGT3PA6NGU5 568 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 A6NJ64 397 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 OR6C65A6NJZ3 312 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 FAM171A2A8MVW0 826 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 PSMD9O00233 223 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 DCTN6O00399 190 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 SLC17A2O00624 439 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 CBR3O75828 277 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 AKR7A3O95154 331 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 PDGFAP04085 211 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 GRPRP30550 384 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 SELENOPP49908 381 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 DSCR4P56555 118 aaPredicted RBP13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 PSMA6P60900 246 aaKnown RBP13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 RPL27P61353 136 aaKnown RBP13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 SLC17A1Q14916 467 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 MPPED2Q15777 294 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 LINC00303Q3SY05 128 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 TMEM255AQ5JRV8 349 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 SLC25A25Q6KCM7 469 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 SLC18B1Q6NT16 456 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 Q6ZTK2 550 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 SERPINA12Q8IW75 414 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 FTMTQ8N4E7 242 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 OR6N1Q8NGY5 312 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 SUN5Q8TC36 379 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 RNF128Q8TEB7 428 aa13.33□□□□□ -0.27
CDK5RAP3-236ENST00000584991 SLC25A36Q96CQ1 311 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms