RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ERGIC3Q9Y282 383 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 SNX5Q9Y5X3 404 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 MAST4O15021 2626 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 UBR5O95071 2799 aaPredicted RBP15.92■□□□□ 0.14
RFFL-211ENST00000584541 IGHV1-18A0A0C4DH31 117 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 METTL15A6NJ78 407 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 C19orf84I3L1E1 186 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 PSMD9O00233 223 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 MYL12BO14950 172 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 SULT1C4O75897 302 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 APOC1P02654 83 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 TACSTD2P09758 323 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 C21orf33P30042 268 aaPredicted RBP15.91■□□□□ 0.14
RFFL-211ENST00000584541 OPRL1P41146 370 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 ETV1P50549 477 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 RIDAP52758 137 aaKnown RBP15.91■□□□□ 0.14
RFFL-211ENST00000584541 MVKQ03426 396 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 CDONQ4KMG0 1287 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 RNLSQ5VYX0 342 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 TMEM108Q6UXF1 575 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 EGFL6Q8IUX8 553 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 ZNF584Q8IVC4 421 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 DMRTC2Q8IXT2 367 aaPredicted RBP15.91■□□□□ 0.14
RFFL-211ENST00000584541 YIPF7Q8N8F6 280 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 MS4A3Q96HJ5 214 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 KCNJ15Q99712 375 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 CDCA4Q9BXL8 241 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 ELOVL3Q9HB03 270 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 CDH20Q9HBT6 801 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 SLCO1C1Q9NYB5 712 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 NPAP1Q9NZP6 1156 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 GNG8Q9UK08 70 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 CAB39Q9Y376 341 aaPredicted RBP15.91■□□□□ 0.14
RFFL-211ENST00000584541 LRP12Q9Y561 859 aa15.91■□□□□ 0.14
RFFL-211ENST00000584541 C5orf49A4QMS7 147 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 CELA3BP08861 270 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 CECR9P0C854 216 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 LIMS3P0CW19 117 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 LIMS4P0CW20 117 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 EPXP11678 715 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 CCNOP22674 350 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 PTAFRP25105 342 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 TPTEP56180 551 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 GALK2Q01415 458 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 ARL9Q6T311 187 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 MEX3BQ6ZN04 569 aaKnown RBP15.9■□□□□ 0.14
RFFL-211ENST00000584541 SYS1Q8N2H4 156 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 SVOPQ8N4V2 548 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 FAM222BQ8WU58 562 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 SGCDQ92629 289 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 POM121L2Q96KW2 1035 aa15.9■□□□□ 0.14
RFFL-211ENST00000584541 DCLRE1CQ96SD1 692 aaKnown RBP15.9■□□□□ 0.14
RFFL-211ENST00000584541 HEATR1Q9H583 2144 aaKnown RBP15.9■□□□□ 0.14
RFFL-211ENST00000584541 ESRP2Q9H6T0 727 aaKnown RBP15.9■□□□□ 0.14
RFFL-211ENST00000584541 SPTBN1Q01082 2364 aaKnown RBP15.89■□□□□ 0.13
RFFL-211ENST00000584541 F5H5K5 113 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 J3QLW9 94 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 CRYAAP02489 173 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 MT-ND2P03891 347 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 MT-ND5P03915 603 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 ZNF19P17023 458 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 IGFBP2P18065 325 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 CRYGSP22914 178 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 DCTDP32321 178 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 ZNF829Q3KNS6 432 aaPredicted RBP15.89■□□□□ 0.13
RFFL-211ENST00000584541 TP53I3Q53FA7 332 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 SEZ6L2Q6UXD5 910 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 ZNF283Q8N7M2 679 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 OR52N1Q8NH53 320 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 C4orf36Q96KX1 117 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 MND1Q9BWT6 205 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 ZNF696Q9H7X3 374 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 CRIM1Q9NZV1 1036 aa15.89■□□□□ 0.13
RFFL-211ENST00000584541 EIF3KQ9UBQ5 218 aaKnown RBP15.89■□□□□ 0.13
RFFL-211ENST00000584541 MRM2Q9UI43 246 aaKnown RBP15.89■□□□□ 0.13
RFFL-211ENST00000584541 LOC100509620A0A075B734 347 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 TMEM129A0AVI4 362 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 A1L4Q6 167 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 PRR32B1ATL7 298 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 M0R135 149 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 MAGEB4O15481 346 aaPredicted RBP15.88■□□□□ 0.13
RFFL-211ENST00000584541 ADRA2AP08913 450 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 CCL2P13500 99 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 CD40P25942 277 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 SLC6A9P48067 706 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 CX3CR1P49238 355 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 PRKXP51817 358 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 OR12D2P58182 307 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 NAAAQ02083 359 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 MRPL28Q13084 256 aaKnown RBP15.88■□□□□ 0.13
RFFL-211ENST00000584541 BEX5Q5H9J7 111 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 ZNF684Q5T5D7 378 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 ZNF544Q6NX49 715 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 ZNF773Q6PK81 442 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 DRAM2Q6UX65 266 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 UNQ6126/PRO20091Q6UXV3 157 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 MYPOPQ86VE0 399 aaPredicted RBP15.88■□□□□ 0.13
RFFL-211ENST00000584541 HAVCR2Q8TDQ0 301 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 SLC7A6Q92536 515 aa15.88■□□□□ 0.13
RFFL-211ENST00000584541 ZNF799Q96GE5 643 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms