RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	ARL1	P40616	181 aa	Predicted RBP	3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	RGS6	P49758	472 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	CLDN8	P56748	225 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	PIGF	Q07326	219 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	FOXF1	Q12946	379 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	PPP1R8	Q12972	351 aa	Known RBP	3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	TTLL9	Q3SXZ7	439 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	ZNF404	Q494X3	552 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	CDON	Q4KMG0	1287 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	CCNYL2	Q5T2Q4	361 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	LRIF1	Q5T3J3	769 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	DHRS4L2	Q6PKH6	230 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	C10orf99	Q6UWK7	81 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	APOOL	Q6UXV4	268 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	C18orf65	Q6ZTR6	163 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	KCTD8	Q6ZWB6	473 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	TMPRSS11B	Q86T26	416 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	MDP1	Q86V88	176 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	IGFN1	Q86VF2	1251 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	ANKRD46	Q86W74	232 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	ZCCHC7	Q8N3Z6	543 aa	Known RBP	3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	L3MBTL4	Q8NA19	623 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	OR2T12	Q8NG77	320 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	OR51G2	Q8NGK0	314 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	OR10A6	Q8NH74	314 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	SYNPR	Q8TBG9	265 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	TMEM106A	Q96A25	262 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	C12orf43	Q96C57	262 aa	Known RBP	3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	CMTM7	Q96FZ5	175 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	APIP	Q96GX9	242 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	EGLN2	Q96KS0	407 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	FCRL1	Q96LA6	429 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	COG8	Q96MW5	612 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	ZBTB18	Q99592	522 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	OSBPL10	Q9BXB5	764 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	YTHDF1	Q9BYJ9	559 aa	Known RBP	3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	DPY30	Q9C005	99 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	KAT8	Q9H7Z6	458 aa	Known RBP	3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	GORASP2	Q9H8Y8	452 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	PFDN4	Q9NQP4	134 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	C8orf4	Q9NR00	106 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	FAM118A	Q9NWS6	357 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	C1orf109	Q9NX04	203 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	ETAA1	Q9NY74	926 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	B3GNT2	Q9NY97	397 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	USE1	Q9NZ43	259 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	ZDHHC8	Q9ULC8	765 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	APLN	Q9ULZ1	77 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	ANGPTL3	Q9Y5C1	460 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	FLVCR1	Q9Y5Y0	555 aa		3.84	□□□□□ -1.79
MSI2-216	ENST00000582772	TMEM229A	B2RXF0	380 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	ALG1L2	C9J202	215 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	C12orf77	C9JDV5	145 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	ZNF587B	E7ETH6	402 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	NPIPB8	E9PQR5	432 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	TMEM178B	H3BS89	294 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	GSTA4	O15217	222 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	PSPN	O60542	156 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	SCN2B	O60939	215 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	MITF	O75030	526 aa	Predicted RBP	3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	HPR	P00739	348 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	SERPINA1	P01009	418 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	SEMG1	P04279	462 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	IL6	P05231	212 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	NR2F6	P10588	404 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	EPB42	P16452	691 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	TNFRSF1A	P19438	455 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	EFNA1	P20827	205 aa	Predicted RBP	3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	DCK	P27707	260 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	S100A3	P33764	101 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	CRAT	P43155	626 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	DIO1	P49895	249 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	ENTPD1	P49961	510 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	ALDH3A2	P51648	485 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	UBE2E1	P51965	193 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	ARFIP1	P53367	373 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	RAB25	P57735	213 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	BLCAP	P62952	87 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	CSNK2A1	P68400	391 aa	Predicted RBP	3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	RAE1	P78406	368 aa	Known RBP	3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	CD47	Q08722	323 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	EXOSC7	Q15024	291 aa	Known RBP	3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	NEDD8	Q15843	81 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	CPSF6	Q16630	551 aa	Known RBP eCLIP	3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	IMPG1	Q17R60	797 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	DPY19L1	Q2PZI1	675 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	PGS1	Q32NB8	556 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	ARHGAP11B	Q3KRB8	267 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	ANKDD1A	Q495B1	522 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	GGTA1P	Q4G0N0	100 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	FAM98B	Q52LJ0	330 aa	Known RBP	3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	TMEM35A	Q53FP2	167 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	SPRN	Q5BIV9	151 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	CDKL4	Q5MAI5	379 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	EXOSC6	Q5RKV6	272 aa	Known RBP	3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	C6orf141	Q5SZD1	244 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	GPR107	Q5VW38	600 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	XAF1	Q6GPH4	301 aa		3.83	□□□□□ -1.8
MSI2-216	ENST00000582772	OR4F3	Q6IEY1	312 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 58 ms