RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 PRSS48Q7RTY5 328 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 WFDC8Q8IUA0 241 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 ZNF679Q8IYX0 411 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 ALDH16A1Q8IZ83 802 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 ZNF485Q8NCK3 441 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 SNX33Q8WV41 574 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 RNF166Q96A37 237 aaPredicted RBP8.28□□□□□ -1.08
RFFL-210ENST00000582308 POM121L2Q96KW2 1035 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 COQ7Q99807 217 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 MED18Q9BUE0 208 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 ALG8Q9BVK2 526 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 CCDC90BQ9GZT6 254 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 HDHD2Q9H0R4 259 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 ZNF696Q9H7X3 374 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 ISG20L2Q9H9L3 353 aaKnown RBP8.28□□□□□ -1.08
RFFL-210ENST00000582308 NDRG3Q9UGV2 375 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 FBXL3Q9UKT7 428 aa8.28□□□□□ -1.08
RFFL-210ENST00000582308 KLF2Q9Y5W3 355 aaPredicted RBP8.28□□□□□ -1.08
RFFL-210ENST00000582308 IQCMA0A1B0GVH7 501 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 TUBAL3A6NHL2 446 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 METTL15A6NJ78 407 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 J3QLW9 94 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 MRPS14O60783 128 aaKnown RBP8.27□□□□□ -1.09
RFFL-210ENST00000582308 SULT1C4O75897 302 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 H2BFMP0C1H6 154 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 CECR9P0C854 216 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 CCL2P13500 99 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 ZNF19P17023 458 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 MYL12AP19105 171 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 CRYGSP22914 178 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 PAX7P23759 505 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 OTX1P32242 354 aaPredicted RBP8.27□□□□□ -1.09
RFFL-210ENST00000582308 MAP2K4P45985 399 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 ECH1Q13011 328 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 TAF13Q15543 124 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 C3orf36Q3SXR2 165 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 TP53I3Q53FA7 332 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 OR2G6Q5TZ20 316 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 ZNF773Q6PK81 442 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 DEGS2Q6QHC5 323 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 PLEKHG7Q6ZR37 379 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 KRT77Q7Z794 578 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 NAA40Q86UY6 237 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 SPARTQ8N0X7 666 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 PAQR4Q8N4S7 273 aaPredicted RBP8.27□□□□□ -1.09
RFFL-210ENST00000582308 NANOGP1Q8N7R0 232 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 ACBD4Q8NC06 268 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 SLC30A7Q8NEW0 376 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 C4orf36Q96KX1 117 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 ATF6BQ99941 703 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 MROQ9BYG7 248 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 ATPIF1Q9UII2 106 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 GNG8Q9UK08 70 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 IKZF2Q9UKS7 526 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 LSM2Q9Y333 95 aaKnown RBP8.27□□□□□ -1.09
RFFL-210ENST00000582308 CAB39Q9Y376 341 aaPredicted RBP8.27□□□□□ -1.09
RFFL-210ENST00000582308 LRP12Q9Y561 859 aa8.27□□□□□ -1.09
RFFL-210ENST00000582308 DCHS2Q6V1P9 2916 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 HRNRQ86YZ3 2850 aaPredicted RBP8.26□□□□□ -1.09
RFFL-210ENST00000582308 TMEM129A0AVI4 362 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 C5orf49A4QMS7 147 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 DPRXA6NFQ7 191 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 F5H5K5 113 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 M0R1B8 84 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 SIAH2O43255 324 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 ZNF254O75437 659 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 SRSF10O75494 262 aaKnown RBP8.26□□□□□ -1.09
RFFL-210ENST00000582308 CLDN1O95832 211 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 PNPP00491 289 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 PTHP01270 115 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 KRT8P05787 483 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 RPSAP08865 295 aaKnown RBP8.26□□□□□ -1.09
RFFL-210ENST00000582308 ACSM4P0C7M7 580 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 SMIM18P0DKX4 95 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 PCMT1P22061 227 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 APLNRP35414 380 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 PSMB10P40306 273 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 KIR2DL3P43628 341 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 GDI2P50395 445 aaKnown RBP8.26□□□□□ -1.09
RFFL-210ENST00000582308 PRKXP51817 358 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 RIDAP52758 137 aaKnown RBP8.26□□□□□ -1.09
RFFL-210ENST00000582308 ACTA2P62736 377 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 GRB2P62993 217 aaKnown RBP8.26□□□□□ -1.09
RFFL-210ENST00000582308 ACTG2P63267 376 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 GALK2Q01415 458 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 NAAAQ02083 359 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 EMX1Q04741 257 aaPredicted RBP8.26□□□□□ -1.09
RFFL-210ENST00000582308 HGFACQ04756 655 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 LIPNQ5VXI9 398 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 TMPRSS11AQ6ZMR5 421 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 SSX8Q7RTT4 187 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 KCTD20Q7Z5Y7 419 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.26□□□□□ -1.09
RFFL-210ENST00000582308 EGFL6Q8IUX8 553 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 DMRTC2Q8IXT2 367 aaPredicted RBP8.26□□□□□ -1.09
RFFL-210ENST00000582308 SYS1Q8N2H4 156 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 KLHL36Q8N4N3 616 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 YIPF7Q8N8F6 280 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 TSPAN14Q8NG11 270 aa8.26□□□□□ -1.09
RFFL-210ENST00000582308 OR52N1Q8NH53 320 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms