RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 PPP2R2BQ00005 443 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 KRTAP1-1Q07627 177 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 RIN1Q13671 783 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 KPNB1Q14974 876 aaKnown RBP10.79□□□□□ -0.68
SNORD55-201ENST00000581525 PTGES3Q15185 160 aaKnown RBP10.79□□□□□ -0.68
SNORD55-201ENST00000581525 CORO6Q6QEF8 472 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 FBXW12Q6X9E4 464 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 CFAP77Q6ZQR2 320 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 RFPL4BQ6ZWI9 263 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 AMIGO2Q86SJ2 522 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 TIGD4Q8IY51 512 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 IQCF1Q8N6M8 205 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 PROKR2Q8NFJ6 384 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 OR9Q1Q8NGQ5 310 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 FAM168AQ92567 244 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 CDADC1Q9BWV3 514 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 GSX1Q9H4S2 264 aaPredicted RBP10.79□□□□□ -0.68
SNORD55-201ENST00000581525 WDR76Q9H967 626 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 DUSP13Q9UII6 198 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 COMMD3-BMI1R4GMX3 469 aa10.79□□□□□ -0.68
SNORD55-201ENST00000581525 ZAR1LA6NP61 321 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 ZNF593O00488 134 aaPredicted RBP10.78□□□□□ -0.68
SNORD55-201ENST00000581525 PRODHO43272 600 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 LY6HO94772 140 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 ABHD16AO95870 558 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 GYPBP06028 91 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 ERCC1P07992 297 aaPredicted RBP10.78□□□□□ -0.68
SNORD55-201ENST00000581525 DBHP09172 617 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 ACSM4P0C7M7 580 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 PSKH1P11801 424 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 RAC2P15153 192 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 POU1F1P28069 291 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 GCH1P30793 250 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 MPV17P39210 176 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 ALDH3B1P43353 468 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 ENTPD1P49961 510 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 PSG7Q13046 419 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 PCGF3Q3KNV8 242 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 FAM209AQ5JX71 171 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 SLC35D3Q5M8T2 416 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 LYPD4Q6UWN0 246 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 ZNF511Q8NB15 262 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 ZNF540Q8NDQ6 660 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 OR2AJ1Q8NGZ0 328 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 ABHD4Q8TB40 342 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 ST7LQ8TDW4 575 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 SLC7A6Q92536 515 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 ATF6BQ99941 703 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 HINT3Q9NQE9 182 aaKnown RBP10.78□□□□□ -0.68
SNORD55-201ENST00000581525 CYSLTR2Q9NS75 346 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 FZR1Q9UM11 496 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 GRIP1Q9Y3R0 1128 aa10.78□□□□□ -0.68
SNORD55-201ENST00000581525 TVP23AA6NH52 213 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 FAM183AA6NL82 134 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 RNF223E7ERA6 249 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 PRR23D1E9PI22 279 aaPredicted RBP10.77□□□□□ -0.69
SNORD55-201ENST00000581525 LY6G6DO95868 133 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 HLA-DQA2P01906 255 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 HEXAP06865 529 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 CD55P08174 381 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 PRR23D2P0DMB1 279 aaPredicted RBP10.77□□□□□ -0.69
SNORD55-201ENST00000581525 DAOP14920 347 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 PAICSP22234 425 aaKnown RBP10.77□□□□□ -0.69
SNORD55-201ENST00000581525 EPHA2P29317 976 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 NR4A2P43354 598 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 CDK5R2Q13319 367 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 MAD2L1BPQ15013 274 aaPredicted RBP10.77□□□□□ -0.69
SNORD55-201ENST00000581525 SLX4IPQ5VYV7 408 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 TMEM236Q5W0B7 351 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 C12orf73Q69YU5 71 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 SHFQ7M4L6 423 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 CPOQ8IVL8 374 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 LINC00346Q8IVM7 164 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 OR51L1Q8NGJ5 315 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 OR5L1Q8NGL2 311 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 UBASH3BQ8TF42 649 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 PYDC1Q8WXC3 89 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 APOBEC3DQ96AK3 386 aaPredicted RBP10.77□□□□□ -0.69
SNORD55-201ENST00000581525 DIRC2Q96SL1 478 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 PITX2Q99697 317 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 SMR3AQ99954 134 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 PKP2Q99959 881 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 POFUT1Q9H488 388 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 MED20Q9H944 212 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 DYNLRB1Q9NP97 96 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 ENOPH1Q9UHY7 261 aa10.77□□□□□ -0.69
SNORD55-201ENST00000581525 SETD2Q9BYW2 2564 aaPredicted RBP10.77□□□□□ -0.69
SNORD55-201ENST00000581525 MITFO75030 526 aaPredicted RBP10.76□□□□□ -0.69
SNORD55-201ENST00000581525 RP2O75695 350 aa10.76□□□□□ -0.69
SNORD55-201ENST00000581525 HPXP02790 462 aa10.76□□□□□ -0.69
SNORD55-201ENST00000581525 TACSTD2P09758 323 aa10.76□□□□□ -0.69
SNORD55-201ENST00000581525 NAT2P11245 290 aa10.76□□□□□ -0.69
SNORD55-201ENST00000581525 ZNF23P17027 643 aa10.76□□□□□ -0.69
SNORD55-201ENST00000581525 ACHEP22303 614 aa10.76□□□□□ -0.69
SNORD55-201ENST00000581525 GSTT1P30711 240 aa10.76□□□□□ -0.69
SNORD55-201ENST00000581525 TMEM33P57088 247 aa10.76□□□□□ -0.69
SNORD55-201ENST00000581525 NKPD1Q17RQ9 610 aa10.76□□□□□ -0.69
SNORD55-201ENST00000581525 ALKBH6Q3KRA9 238 aa10.76□□□□□ -0.69
SNORD55-201ENST00000581525 SPATA46Q5T0L3 261 aa10.76□□□□□ -0.69
SNORD55-201ENST00000581525 DCXRQ7Z4W1 244 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms