RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 CD40P25942 277 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 STOMP27105 288 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 APLNRP35414 380 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 RGS6P49758 472 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 IDH3GP51553 393 aaPredicted RBP9.02□□□□□ -0.97
CCDC47-203ENST00000580986 GABARAPL2P60520 117 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 NAAAQ02083 359 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 PIGFQ07326 219 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 MRPL28Q13084 256 aaKnown RBP9.02□□□□□ -0.97
CCDC47-203ENST00000580986 EIF2B1Q14232 305 aaKnown RBP9.02□□□□□ -0.97
CCDC47-203ENST00000580986 GALEQ14376 348 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 RAB39AQ14964 217 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 CDONQ4KMG0 1287 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF684Q5T5D7 378 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 CORO6Q6QEF8 472 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 ARL9Q6T311 187 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 LINC00346Q8IVM7 164 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 SYS1Q8N2H4 156 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 CPEB3Q8NE35 698 aaKnown RBP9.02□□□□□ -0.97
CCDC47-203ENST00000580986 SLC30A7Q8NEW0 376 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 OR4F15Q8NGB8 312 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 OR52I1Q8NGK6 324 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 LINC01560Q8TB33 94 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 GGHQ92820 318 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 ITFG2Q969R8 447 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 SPTSSAQ969W0 71 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 C14orf79Q96F83 325 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 OR8B4Q96RC9 309 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 KCNJ15Q99712 375 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF649Q9BS31 505 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 TMEM204Q9BSN7 226 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 MROQ9BYG7 248 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 AMBNQ9NP70 447 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 AASSQ9UDR5 926 aa9.02□□□□□ -0.97
CCDC47-203ENST00000580986 EXOSC1Q9Y3B2 195 aaKnown RBP9.02□□□□□ -0.97
CCDC47-203ENST00000580986 SPTAN1Q13813 2472 aaKnown RBP9.02□□□□□ -0.97
CCDC47-203ENST00000580986 FASNP49327 2511 aaKnown RBP9.01□□□□□ -0.97
CCDC47-203ENST00000580986 IGHV2OR16-5A0A0B4J2B6 119 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.01□□□□□ -0.97
CCDC47-203ENST00000580986 A0A1W2PQL4 384 aaPredicted RBP9.01□□□□□ -0.97
CCDC47-203ENST00000580986 A0A1W2PR80 420 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 ACOD1A6NK06 481 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 H3BSA7 217 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 XPNPEP2O43895 674 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 FAM20BO75063 409 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 VSIG8P0DPA2 414 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 LOXP28300 417 aaPredicted RBP9.01□□□□□ -0.97
CCDC47-203ENST00000580986 RPS27P42677 84 aaKnown RBP9.01□□□□□ -0.97
CCDC47-203ENST00000580986 HTR5AP47898 357 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 GDI2P50395 445 aaKnown RBP9.01□□□□□ -0.97
CCDC47-203ENST00000580986 TUBA1BP68363 451 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 TUBA4AP68366 448 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 ADAM5Q6NVV9 412 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF774Q6NX45 483 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF322Q6U7Q0 402 aaPredicted RBP9.01□□□□□ -0.97
CCDC47-203ENST00000580986 DRAM2Q6UX65 266 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 PLEKHG7Q6ZR37 379 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 COLCA1Q6ZS62 124 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 TUBA1AQ71U36 451 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.01□□□□□ -0.97
CCDC47-203ENST00000580986 WFDC8Q8IUA0 241 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF540Q8NDQ6 660 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 NUP37Q8NFH4 326 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 BPIFB6Q8NFQ5 453 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 AKR7LQ8NHP1 331 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 THEM6Q8WUY1 208 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 MYDGFQ969H8 173 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 TMEM80Q96HE8 168 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 COG8Q96MW5 612 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 COPS4Q9BT78 406 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 CDCA4Q9BXL8 241 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 SP140LQ9H930 580 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 ELOVL3Q9HB03 270 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 TBCCD1Q9NVR7 557 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 ERVK13-1Q9NX77 482 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 UBAP1Q9NZ09 502 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 COPS3Q9UNS2 423 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 KLHDC2Q9Y2U9 406 aa9.01□□□□□ -0.97
CCDC47-203ENST00000580986 CAB39Q9Y376 341 aaPredicted RBP9.01□□□□□ -0.97
CCDC47-203ENST00000580986 LOC100509620A0A075B734 347 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 TMEM129A0AVI4 362 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 DAPL1A0PJW8 107 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 DPRXA6NFQ7 191 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 A6NNC1 897 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 M0R135 149 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 M0R1B8 84 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 ABHD16AO95870 558 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 KRT8P05787 483 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 CDK1P06493 297 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 TACSTD2P09758 323 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 H2BFMP0C1H6 154 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 COX6B1P14854 86 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 MYL12AP19105 171 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 APEX1P27695 318 aaKnown RBP9□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF83P51522 516 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 RIDAP52758 137 aaKnown RBP9□□□□□ -0.97
CCDC47-203ENST00000580986 TPTEP56180 551 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 PSMA6P60900 246 aaKnown RBP9□□□□□ -0.97
CCDC47-203ENST00000580986 ZNF85Q03923 595 aa9□□□□□ -0.97
CCDC47-203ENST00000580986 BSPH1Q075Z2 132 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms