RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 CDC20BQ86Y33 519 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 ERI1Q8IV48 349 aaKnown RBP13.49□□□□□ -0.25
SS18-216ENST00000580751 KLHL36Q8N4N3 616 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 ZNF511Q8NB15 262 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 OR10H4Q8NGA5 316 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 C11orf40Q8WZ69 217 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 RADILQ96JH8 1075 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 ZNF649Q9BS31 505 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 CLEC4MQ9H2X3 399 aaPredicted RBP13.49□□□□□ -0.25
SS18-216ENST00000580751 C1orf198Q9H425 327 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 NOX3Q9HBY0 568 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 MRPL22Q9NWU5 206 aaKnown RBP13.49□□□□□ -0.25
SS18-216ENST00000580751 RNF115Q9Y4L5 304 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 CADP27708 2225 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 NOTCH2Q04721 2471 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 APCP25054 2843 aa13.49□□□□□ -0.25
SS18-216ENST00000580751 ROS1P08922 2347 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 NBPF19A0A087WUL8 3843 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 IGHV1-18A0A0C4DH31 117 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 DPRXA6NFQ7 191 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 FAM171A2A8MVW0 826 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 ZNF593O00488 134 aaPredicted RBP13.48□□□□□ -0.25
SS18-216ENST00000580751 ABCD4O14678 606 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 TFP02787 698 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 TACSTD2P09758 323 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 CECR9P0C854 216 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 PATE4P0C8F1 98 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 ZNF32P17041 273 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 LOXP28300 417 aaPredicted RBP13.48□□□□□ -0.25
SS18-216ENST00000580751 WNT4P56705 351 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 ADAM8P78325 824 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 PLP2Q04941 152 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 ENDOGQ14249 297 aaKnown RBP13.48□□□□□ -0.25
SS18-216ENST00000580751 KCTD18Q6PI47 426 aaPredicted RBP13.48□□□□□ -0.25
SS18-216ENST00000580751 B3GLCTQ6Y288 498 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 PLEKHG7Q6ZR37 379 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 IL17RDQ8NFM7 739 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 OR6N2Q8NGY6 317 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 FGFBP3Q8TAT2 258 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 MUL1Q969V5 352 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 FBXO17Q96EF6 278 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 COG8Q96MW5 612 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 KCNS3Q9BQ31 491 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 TMEM204Q9BSN7 226 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 CDADC1Q9BWV3 514 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 LAMP5Q9UJQ1 280 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 LSM2Q9Y333 95 aaKnown RBP13.48□□□□□ -0.25
SS18-216ENST00000580751 TIMM10BQ9Y5J6 103 aa13.48□□□□□ -0.25
SS18-216ENST00000580751 PLCE1Q9P212 2302 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 IQCMA0A1B0GVH7 501 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 A0A1W2PQL4 384 aaPredicted RBP13.47□□□□□ -0.25
SS18-216ENST00000580751 SELENOFO60613 162 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 ZNF254O75437 659 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 MPZL1O95297 269 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 PTHP01270 115 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 CRYAAP02489 173 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 MT-ND5P03915 603 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 SERPINA5P05154 406 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 SCG5P05408 212 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 ZNF14P17017 642 aaPredicted RBP13.47□□□□□ -0.25
SS18-216ENST00000580751 ETV1P50549 477 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 TAS2R43P59537 309 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 ROM1Q03395 351 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 CDONQ4KMG0 1287 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 ZNF322Q6U7Q0 402 aaPredicted RBP13.47□□□□□ -0.25
SS18-216ENST00000580751 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.47□□□□□ -0.25
SS18-216ENST00000580751 ALDH16A1Q8IZ83 802 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 ZNF485Q8NCK3 441 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 ZNF75AQ96N20 296 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 HS3ST6Q96QI5 342 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 ALG8Q9BVK2 526 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 OR2H1Q9GZK4 316 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 ASH2LQ9UBL3 628 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 CYB5R1Q9UHQ9 305 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 FBN2P35556 2912 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 SPG11Q96JI7 2443 aa13.47□□□□□ -0.25
SS18-216ENST00000580751 POLQO75417 2590 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 TVP23AA6NH52 213 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 APOL3O95236 402 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 GPANK1O95872 356 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 CELA3BP08861 270 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 MRPL3P09001 348 aaKnown RBP13.46□□□□□ -0.25
SS18-216ENST00000580751 PRF1P14222 555 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 NAA10P41227 235 aaPredicted RBP13.46□□□□□ -0.25
SS18-216ENST00000580751 PSG4Q00888 419 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 NAAAQ02083 359 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 ZNF85Q03923 595 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 DBPQ10586 325 aaPredicted RBP13.46□□□□□ -0.25
SS18-216ENST00000580751 MLLT11Q13015 90 aaPredicted RBP13.46□□□□□ -0.25
SS18-216ENST00000580751 GPR50Q13585 617 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 RAB39AQ14964 217 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 MEP1BQ16820 701 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 PABPC1L2AQ5JQF8 200 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 ADAM5Q6NVV9 412 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 SLC22A25Q6T423 547 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 ZNF704Q6ZNC4 412 aaPredicted RBP13.46□□□□□ -0.25
SS18-216ENST00000580751 DPY19L4Q7Z388 723 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 SNX33Q8WV41 574 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 MS4A3Q96HJ5 214 aa13.46□□□□□ -0.25
SS18-216ENST00000580751 BABAM2Q9NXR7 383 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms