RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 PAX6P26367 422 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 ECHS1P30084 290 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 SRP9P49458 86 aaKnown RBP6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 CRISP3P54108 245 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 RAD23AP54725 363 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 CLRN1P58418 232 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 GNG11P61952 73 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 TXNL4AP83876 142 aaKnown RBP6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 CD83Q01151 205 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 MAB21L1Q13394 359 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 PIN1Q13526 163 aaPredicted RBP6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 CCDC153Q494R4 210 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 TM4SF20Q53R12 229 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 FAM91A1Q658Y4 838 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 ZFAND6Q6FIF0 208 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 ULK3Q6PHR2 472 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 ARL9Q6T311 187 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 MEPCEQ7L2J0 689 aaKnown RBP6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 C1orf87Q8N0U7 546 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 C10orf111Q8N326 155 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 C10orf53Q8N6V4 93 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 NPEPL1Q8NDH3 523 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 LY6G5BQ8NDX9 201 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 NOXO1Q8NFA2 376 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 Q8TCH9 128 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 PIFOQ8TCI5 191 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 DNAJA4Q8WW22 397 aaPredicted RBP6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 TESCQ96BS2 214 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 TMEM19Q96HH6 336 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 MAELQ96JY0 434 aaKnown RBP6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 DDOQ99489 341 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 EPYCQ99645 322 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 WFDC6Q9BQY6 131 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 KCNN2Q9H2S1 579 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 TBCCD1Q9NVR7 557 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 P2RX2Q9UBL9 471 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 DNAJB11Q9UBS4 358 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 ZNF232Q9UNY5 417 aa6.22□□□□□ -1.41
SMARCE1-217ENST00000580654 A0A0G2JPF8 293 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 A0A1B0GW55 424 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 A0A1B0GWJ7 208 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 ELOVL7A1L3X0 281 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 HNRNPCL2B2RXH8 293 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 HNRNPCL3B7ZW38 293 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 ZSCAN12O43309 604 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 RNF13O43567 381 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 HNRNPCL1O60812 293 aaKnown RBP6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 TRIM13O60858 407 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 TRMUO75648 421 aaKnown RBP6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 OR6A2O95222 327 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 PAHP00439 452 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 MT-ATP6P00846 226 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 LHBP01229 141 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 DUX4L2P0CJ85 424 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 DUX4L3P0CJ86 424 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 DUX4L4P0CJ87 422 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 DUX4L5P0CJ88 424 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 DUX4L6P0CJ89 424 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 DUX4L7P0CJ90 424 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 HNRNPCL4P0DMR1 293 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 PF4V1P10720 104 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 CPEP16870 476 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 LAP3P28838 519 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 ELF3P78545 371 aaPredicted RBP6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 GUCY1A3Q02108 690 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 FMODQ06828 376 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 MPPED2Q15777 294 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 SGCAQ16586 387 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 PDCD4Q53EL6 469 aaKnown RBP6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 TCTEX1D4Q5JR98 221 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 FAM27BQ5VT28 67 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 SFRP4Q6FHJ7 346 aaPredicted RBP6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 OR2T2Q6IF00 324 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 DUX4L9Q6RFH8 374 aaPredicted RBP6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 Q6ZS46 218 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 LINC00482Q8N8I6 264 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 SDR9C7Q8NEX9 313 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 OR8G5Q8NG78 346 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 OR13G1Q8NGZ3 307 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 SLC7A13Q8TCU3 470 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 PTP4A1Q93096 173 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 TMEM43Q9BTV4 400 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 CHID1Q9BWS9 393 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 NPFFR1Q9GZQ6 430 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 PCDHAC1Q9H158 963 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 MEAF6Q9HAF1 191 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 CALML5Q9NZT1 146 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 DUX4Q9UBX2 424 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 TBK1Q9UHD2 729 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 IFT52Q9Y366 437 aa6.21□□□□□ -1.42
SMARCE1-217ENST00000580654 WDR91A4D1P6 747 aa6.2□□□□□ -1.42
SMARCE1-217ENST00000580654 H0YHG0 523 aa6.2□□□□□ -1.42
SMARCE1-217ENST00000580654 LGALS8O00214 317 aa6.2□□□□□ -1.42
SMARCE1-217ENST00000580654 DVL1O14640 695 aa6.2□□□□□ -1.42
SMARCE1-217ENST00000580654 TPST1O60507 370 aa6.2□□□□□ -1.42
SMARCE1-217ENST00000580654 PF4P02776 101 aa6.2□□□□□ -1.42
SMARCE1-217ENST00000580654 HLA-DPB1P04440 258 aa6.2□□□□□ -1.42
SMARCE1-217ENST00000580654 SCG5P05408 212 aa6.2□□□□□ -1.42
SMARCE1-217ENST00000580654 CST2P09228 141 aa6.2□□□□□ -1.42
SMARCE1-217ENST00000580654 CCDC159P0C7I6 412 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms