RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SEZ6L2Q6UXD5 910 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 CFAP77Q6ZQR2 320 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 AHSA2Q719I0 299 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 TBX5Q99593 518 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 KCNJ15Q99712 375 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 DUSP21Q9H596 190 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 TUBG2Q9NRH3 451 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 UBAP1Q9NZ09 502 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 CRIM1Q9NZV1 1036 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 PCDHGB5Q9Y5G0 923 aa12.42□□□□□ -0.42
SKA2-205ENST00000580541 C5orf49A4QMS7 147 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 METTL15A6NJ78 407 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 ACOD1A6NK06 481 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 J3QW42 95 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 RGS10O43665 173 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 APOL3O95236 402 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 TNFAIP8O95379 198 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 CDK1P06493 297 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 CD3EP07766 207 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 CCNOP22674 350 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 CD40P25942 277 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 APEX1P27695 318 aaKnown RBP12.41□□□□□ -0.42
SKA2-205ENST00000580541 PCSK6P29122 969 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 CHN2P52757 468 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 GABARAPL2P60520 117 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 SLC35A2P78381 396 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 SPTAN1Q13813 2472 aaKnown RBP12.41□□□□□ -0.42
SKA2-205ENST00000580541 RNLSQ5VYX0 342 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 OTPQ5XKR4 325 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 DRAM2Q6UX65 266 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 CPEB3Q8NE35 698 aaKnown RBP12.41□□□□□ -0.42
SKA2-205ENST00000580541 OR5L1Q8NGL2 311 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 ZNF75AQ96N20 296 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 OR8B4Q96RC9 309 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 NR1H4Q96RI1 486 aaPredicted RBP12.41□□□□□ -0.42
SKA2-205ENST00000580541 FKBP14Q9NWM8 211 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 ERVK13-1Q9NX77 482 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 CAB39Q9Y376 341 aaPredicted RBP12.41□□□□□ -0.42
SKA2-205ENST00000580541 RTTNQ86VV8 2226 aa12.41□□□□□ -0.42
SKA2-205ENST00000580541 ANKHD1Q8IWZ3 2542 aaKnown RBP12.4□□□□□ -0.42
SKA2-205ENST00000580541 IGHV1-18A0A0C4DH31 117 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 ZNF503-AS2A6NEH8 195 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 F5H5K5 113 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 C19orf84I3L1E1 186 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 RPSAP08865 295 aaKnown RBP12.4□□□□□ -0.42
SKA2-205ENST00000580541 CECR9P0C854 216 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 RNF224P0DH78 156 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 OPRL1P41146 370 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 NAAAQ02083 359 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 SNTB1Q13884 538 aaKnown RBP12.4□□□□□ -0.42
SKA2-205ENST00000580541 ZNF829Q3KNS6 432 aaPredicted RBP12.4□□□□□ -0.42
SKA2-205ENST00000580541 NCMAPQ5T1S8 102 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 PRSS48Q7RTY5 328 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 LHFPL3Q86UP9 236 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 SYS1Q8N2H4 156 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 KLHL36Q8N4N3 616 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 ZNF283Q8N7M2 679 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 YIPF7Q8N8F6 280 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 ACBD4Q8NC06 268 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 PLPPR2Q96GM1 343 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 POM121L2Q96KW2 1035 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 ALG8Q9BVK2 526 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 BCL2L14Q9BZR8 327 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 CCDC90BQ9GZT6 254 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 PNRC2Q9NPJ4 139 aaKnown RBP12.4□□□□□ -0.42
SKA2-205ENST00000580541 GRIP1Q9Y3R0 1128 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 SNX5Q9Y5X3 404 aa12.4□□□□□ -0.42
SKA2-205ENST00000580541 USP9XQ93008 2570 aaPredicted RBP12.4□□□□□ -0.42
SKA2-205ENST00000580541 PRR14LQ5THK1 2151 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 A1L4Q6 167 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 M0R135 149 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 MYL12BO14950 172 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 CLDN1O95832 211 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 ABHD16AO95870 558 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 MT-ND5P03915 603 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 SLC6A9P48067 706 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 GBX2P52951 348 aaPredicted RBP12.39□□□□□ -0.43
SKA2-205ENST00000580541 RPS23P62266 143 aaKnown RBP12.39□□□□□ -0.43
SKA2-205ENST00000580541 KCTD21Q4G0X4 260 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 CDONQ4KMG0 1287 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 SLC22A25Q6T423 547 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 LRRN1Q6UXK5 716 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 C22orf34Q6ZV56 151 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 SPATC1Q76KD6 591 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 ZNF584Q8IVC4 421 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 SVOPQ8N4V2 548 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 OR52H1Q8NGJ2 320 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 SMAP2Q8WU79 429 aaPredicted RBP12.39□□□□□ -0.43
SKA2-205ENST00000580541 ZNF799Q96GE5 643 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 C4orf45Q96LM5 186 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 MND1Q9BWT6 205 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 CDCA4Q9BXL8 241 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 NOX3Q9HBY0 568 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 TBCCD1Q9NVR7 557 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 SLCO1C1Q9NYB5 712 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 NPAP1Q9NZP6 1156 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 GNG8Q9UK08 70 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 COPS3Q9UNS2 423 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 FLNCQ14315 2725 aa12.39□□□□□ -0.43
SKA2-205ENST00000580541 LOC100509620A0A075B734 347 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms