RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 GABARAPL2P60520 117 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 GALEQ14376 348 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 RSPO1Q2MKA7 263 aaPredicted RBP13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 KRTAP27-1Q3LI81 207 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 CDONQ4KMG0 1287 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 ZNF684Q5T5D7 378 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 TMEM108Q6UXF1 575 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 KRT77Q7Z794 578 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 ZNF679Q8IYX0 411 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 SLC7A6Q92536 515 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 SIGLEC11Q96RL6 698 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 KCNJ15Q99712 375 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 ALG8Q9BVK2 526 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 MROQ9BYG7 248 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 ERVK-18Q9QC07 812 aa13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 EXOSC1Q9Y3B2 195 aaKnown RBP13.79□□□□□ -0.2
CSNK1D-212ENST00000580061 MAGEB4O15481 346 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 ZNF254O75437 659 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 DBHP09172 617 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 CCL2P13500 99 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 MYL12AP19105 171 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 PTAFRP25105 342 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 CD40P25942 277 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 OTX1P32242 354 aaPredicted RBP13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 GDI2P50395 445 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 ETV1P50549 477 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 CHN2P52757 468 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 GRB2P62993 217 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 NAAAQ02083 359 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 TAF13Q15543 124 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 TBC1D28Q2M2D7 210 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 BEX5Q5H9J7 111 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 NCMAPQ5T1S8 102 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 IL17RDQ8NFM7 739 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 OR1J2Q8NGS2 313 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 SNX33Q8WV41 574 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 PSMG3-AS1Q96PY0 264 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 ESRP2Q9H6T0 727 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 ELOVL3Q9HB03 270 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 SLC24A3Q9HC58 644 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 CLEC2DQ9UHP7 191 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 MRM2Q9UI43 246 aaKnown RBP13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 IKZF2Q9UKS7 526 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 LRP12Q9Y561 859 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 ICE1Q9Y2F5 2266 aa13.78□□□□□ -0.2
CSNK1D-212ENST00000580061 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 C5orf49A4QMS7 147 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 TRIM64A6NGJ6 449 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 METTL15A6NJ78 407 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 DEFB108AA8MXU0 73 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 F5H5K5 113 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 SIAH2O43255 324 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 RGS10O43665 173 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 SULT1C4O75897 302 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 ABHD16AO95870 558 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 KRT8P05787 483 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 ZNF35P13682 527 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 CCNOP22674 350 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 EEF1B2P24534 225 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 HSD11B1P28845 292 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 DCTDP32321 178 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 ACTA2P62736 377 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 ACTG2P63267 376 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 GALK2Q01415 458 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 BSPH1Q075Z2 132 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 KCTD21Q4G0X4 260 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 RNLSQ5VYX0 342 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 SP5Q6BEB4 398 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 PLEKHG7Q6ZR37 379 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 PRSS48Q7RTY5 328 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 PAQR4Q8N4S7 273 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 SPTSSAQ969W0 71 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 MRPL48Q96GC5 212 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 PLPPR2Q96GM1 343 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 DCLRE1CQ96SD1 692 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 MYCBPQ99417 103 aaPredicted RBP13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 CDCA4Q9BXL8 241 aa13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 CHCHD3Q9NX63 227 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 UTP20O75691 2785 aaKnown RBP13.77□□□□□ -0.21
CSNK1D-212ENST00000580061 IGHV2OR16-5A0A0B4J2B6 119 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 M0R135 149 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 CRYAAP02489 173 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 MT-ND2P03891 347 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 HTR1AP08908 422 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 ACSM4P0C7M7 580 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 CALCRP30988 508 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 PRKXP51817 358 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 RIDAP52758 137 aaKnown RBP13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 OR12D2P58182 307 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 HGFACQ04756 655 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 SPOCK1Q08629 439 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 IRF3Q14653 427 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 DAZAP2Q15038 168 aaPredicted RBP13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 TP53I3Q53FA7 332 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 KCTD20Q7Z5Y7 419 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 EGFL6Q8IUX8 553 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 SYS1Q8N2H4 156 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 ZNF799Q96GE5 643 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 C4orf36Q96KX1 117 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms