RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 UGT2B11O75310 529 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 EIF3GO75821 320 aaKnown RBP eCLIP2.58□□□□□ -2
SMCHD1-202ENST00000577300 FAM107AO95990 144 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 IFNA10P01566 189 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 CD5P06127 495 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 ERCC1P07992 297 aaPredicted RBP2.58□□□□□ -2
SMCHD1-202ENST00000577300 HTR1AP08908 422 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 ACSM4P0C7M7 580 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 HSPD1P10809 573 aaKnown RBP2.58□□□□□ -2
SMCHD1-202ENST00000577300 KCNE1P15382 129 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 ZNF250P15622 560 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 NELFEP18615 380 aaKnown RBP2.58□□□□□ -2
SMCHD1-202ENST00000577300 MARCKSP29966 332 aaPredicted RBP2.58□□□□□ -2
SMCHD1-202ENST00000577300 SLC6A1P30531 599 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 ACVR1BP36896 505 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 GRIA1P42261 906 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 MAGEA6P43360 314 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 RBP2P50120 134 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 SNAP25P60880 206 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 YWHAGP61981 247 aaKnown RBP eCLIP2.58□□□□□ -2
SMCHD1-202ENST00000577300 CCZ1BP86790 482 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 CCZ1P86791 482 aaPredicted RBP2.58□□□□□ -2
SMCHD1-202ENST00000577300 STX4Q12846 297 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 IL18R1Q13478 541 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 OXA1LQ15070 435 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 PSG3Q16557 428 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 GUK1Q16774 197 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 IMPG1Q17R60 797 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 IFI44LQ53G44 452 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 TMEM41BQ5BJD5 291 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 ZNF789Q5FWF6 425 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 FBXW9Q5XUX1 488 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 TIGD3Q6B0B8 471 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 ASPHD2Q6ICH7 369 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 RWDD4Q6NW29 188 aaKnown RBP2.58□□□□□ -2
SMCHD1-202ENST00000577300 CDC42EP5Q6NZY7 148 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 SCIMPQ6UWF3 145 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 SPNS3Q6ZMD2 512 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 Q7L0L9 218 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 EIF3MQ7L2H7 374 aaKnown RBP2.58□□□□□ -2
SMCHD1-202ENST00000577300 SLC16A13Q7RTY0 426 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 C16orf62Q7Z3J2 963 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 ERASQ7Z444 233 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 LYG2Q86SG7 212 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 LUZP2Q86TE4 346 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 SLC26A11Q86WA9 606 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 SVOPLQ8N434 492 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 NECAB1Q8N987 351 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 DCAF4L2Q8NA75 395 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 GATSQ8NAP1 163 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 CCDC54Q8NEL0 328 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 TMEM185AQ8NFB2 350 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 OR5B17Q8NGF7 314 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 OR8J3Q8NGG0 315 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 NRGNQ92686 78 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 GTF2H4Q92759 462 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 CDS1Q92903 461 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 TCEAL3Q969E4 200 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 MRPL53Q96EL3 112 aaKnown RBP2.58□□□□□ -2
SMCHD1-202ENST00000577300 L3HYPDHQ96EM0 354 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 CERS2Q96G23 380 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 HBEGFQ99075 208 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 PFDN5Q99471 154 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 NPAS2Q99743 824 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 OMDQ99983 421 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 FEM1AQ9BSK4 669 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 MED10Q9BTT4 135 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 MED18Q9BUE0 208 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 FUNDC2Q9BWH2 189 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 TM2D1Q9BX74 207 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 MROQ9BYG7 248 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 ROPN1BQ9BZX4 212 aaPredicted RBP2.58□□□□□ -2
SMCHD1-202ENST00000577300 OR51J1Q9H342 316 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 ACTR8Q9H981 624 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 GPN2Q9H9Y4 310 aaPredicted RBP2.58□□□□□ -2
SMCHD1-202ENST00000577300 CALHM2Q9HA72 323 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 LYRM4Q9HD34 91 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 OR2S2Q9NQN1 319 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 BIN3Q9NQY0 253 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 BABAM2Q9NXR7 383 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 B3GNT2Q9NY97 397 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 ZNF282Q9UDV7 671 aaPredicted RBP2.58□□□□□ -2
SMCHD1-202ENST00000577300 GLS2Q9UI32 602 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 MRM2Q9UI43 246 aaKnown RBP2.58□□□□□ -2
SMCHD1-202ENST00000577300 ZNF225Q9UK10 706 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 PLA2G4CQ9UP65 541 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 PSG11Q9UQ72 335 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 UTP11Q9Y3A2 253 aaKnown RBP2.58□□□□□ -2
SMCHD1-202ENST00000577300 UGT2A1Q9Y4X1 527 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 ZNF518AQ6AHZ1 1483 aa2.58□□□□□ -2
SMCHD1-202ENST00000577300 MAGI1Q96QZ7 1491 aaPredicted RBP2.58□□□□□ -2
SMCHD1-202ENST00000577300 BAZ1AQ9NRL2 1556 aaPredicted RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 HIVEP2P31629 2446 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 KCNE1BA0A087WTH5 132 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 TRBV7-9A0A0J9YWB2 115 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 M0QZ92 97 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 PSMD12O00232 456 aaPredicted RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 CDC7O00311 574 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 ADAM12O43184 909 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 CHP2O43745 196 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms