RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 C12orf71A8MTZ7 269 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 H7C1C5 153 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 IFNL4K9M1U5 179 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 PLXNB1O43157 2135 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 ENSAO43768 121 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 DOK2O60496 412 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 DBHP09172 617 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 COX5BP10606 129 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 RAC2P15153 192 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 TNFRSF1BP20333 461 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 MSR1P21757 451 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 PSMB10P40306 273 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 SRP9P49458 86 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 PRSS12P56730 875 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 CTXN1P60606 82 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 RPL27P61353 136 aaKnown RBP8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 ARF6P62330 175 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 LCN6P62502 163 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 PIN1Q13526 163 aaPredicted RBP8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 ALG10Q5BKT4 473 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 KPRPQ5T749 579 aaPredicted RBP8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 EPGNQ6UW88 154 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 DLEU7Q6UYE1 221 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 DCDC5Q6ZRR9 648 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 VASH1Q7L8A9 365 aaPredicted RBP8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 C11orf65Q8NCR3 313 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 OR8G5Q8NG78 346 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 MRAPQ8TCY5 172 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 TMEM239Q8WW34 195 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 LIPHQ8WWY8 451 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 TAMM41Q96BW9 452 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 WDFY2Q96P53 400 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 CPPED1Q9BRF8 314 aaPredicted RBP8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 TRIM15Q9C019 465 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 PCDHAC1Q9H158 963 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 C16orf95Q9H693 158 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 TMCC3Q9ULS5 477 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 CORO2BQ9UQ03 480 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 DNAH9Q9NYC9 4486 aa8.37□□□□□ -1.07
NPLOC4-220ENST00000576940 IGHV1-69DA0A0B4J2H0 117 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 GMNCA6NCL1 334 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 PHYHO14832 338 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 SGCEO43556 437 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 FSTL3O95633 263 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 IGHV1-69P01742 117 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 VSIG8P0DPA2 414 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 MDH1P40925 334 aaKnown RBP8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 MTPNP58546 118 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 STX1BP61266 288 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 EGR3Q06889 387 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 MAB21L1Q13394 359 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 ZNF181Q2M3W8 571 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 SFRP4Q6FHJ7 346 aaPredicted RBP8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 SLC35E4Q6ICL7 350 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 MICU2Q8IYU8 434 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 C1orf87Q8N0U7 546 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 PIP4P2Q8N4L2 257 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 C11orf44Q8N8P7 122 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 LRRC75AQ8NAA5 344 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 SCCPDHQ8NBX0 429 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 BHLHE23Q8NDY6 225 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 SLC26A7Q8TE54 656 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 ZNF582Q96NG8 517 aaPredicted RBP8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 TECTBQ96PL2 329 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 WDR76Q9H967 626 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 KIF17Q9P2E2 1029 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 CTSZQ9UBR2 303 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 RIMS3Q9UJD0 308 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 HIF3AQ9Y2N7 669 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 SH3GLB1Q9Y371 365 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 USH1CQ9Y6N9 552 aa8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 TET2Q6N021 2002 aaPredicted RBP8.36□□□□□ -1.07
NPLOC4-220ENST00000576940 NPIPB13A6NJU9 1138 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 NPIPB4C9JG80 1138 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 FBP2O00757 339 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 TSPAN9O75954 239 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 OPN1MWP04001 364 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 LIPFP07098 398 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 OPN1MW2P0DN77 364 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 OPN1MW3P0DN78 364 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 NR2C1P13056 603 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 IRF2P14316 349 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 RBM34P42696 430 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 MRPL19P49406 292 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 CRYBA2P53672 197 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 LOXL3P58215 753 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 TAS2R41P59536 307 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 MAGOHP61326 146 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 CBX1P83916 185 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 PRB3Q04118 309 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 SCRN3Q0VDG4 424 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 COX10Q12887 443 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 MPPED2Q15777 294 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 CYP51A1Q16850 503 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 AGKQ53H12 422 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 CCDC92Q53HC0 331 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 OXLD1Q5BKU9 147 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 METTL11BQ5VVY1 283 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 PRAMEF6Q5VXH4 476 aa8.35□□□□□ -1.07
NPLOC4-220ENST00000576940 CD276Q5ZPR3 534 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms