RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 PABPC1L2AQ5JQF8 200 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 THEM4Q5T1C6 240 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 FAHD2BQ6P2I3 314 aaPredicted RBP5.28□□□□□ -1.56
NUP88-212ENST00000576708 TMEM154Q6P9G4 183 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 CCDC80Q76M96 950 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 IGFN1Q86VF2 1251 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 CALHM3Q86XJ0 350 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 MICU2Q8IYU8 434 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 ZNF101Q8IZC7 436 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 RBM15BQ8NDT2 890 aaKnown RBP5.28□□□□□ -1.56
NUP88-212ENST00000576708 NOXO1Q8NFA2 376 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 PPP1R35Q8TAP8 253 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 ZNF519Q8TB69 540 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 TMEM239Q8WW34 195 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 NABP1Q96AH0 204 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 NMD3Q96D46 503 aaKnown RBP5.28□□□□□ -1.56
NUP88-212ENST00000576708 SGTBQ96EQ0 304 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 FAHD2AQ96GK7 314 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 MAGEB18Q96M61 343 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 TMEM120AQ9BXJ8 343 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 PCDHAC1Q9H158 963 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 ZNF665Q9H7R5 613 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 INIPQ9NRY2 104 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 FBXL3Q9UKT7 428 aa5.28□□□□□ -1.56
NUP88-212ENST00000576708 ZNF346Q9UL40 294 aaKnown RBP5.28□□□□□ -1.56
NUP88-212ENST00000576708 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.28□□□□□ -1.567e-13■■■■■ 48.1
NUP88-212ENST00000576708 IGHV1-69-2A0A0G2JMI3 117 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 IQCMA0A1B0GVH7 501 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 A0A1W2PRG6 482 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 SLC22A23A1A5C7 686 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 C5orf49A4QMS7 147 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 ZSCAN5BA6NJL1 495 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 H7C1C5 153 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 PLPP2O43688 288 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 MTRF1O75570 445 aaKnown RBP5.27□□□□□ -1.57
NUP88-212ENST00000576708 PRSS23O95084 383 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 MPZL1O95297 269 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 SNAP29O95721 258 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 NGFP01138 241 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 TFP02787 698 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 MT-ND1P03886 318 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 CD1AP06126 327 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 RPS2P15880 293 aaKnown RBP5.27□□□□□ -1.57
NUP88-212ENST00000576708 MALP21145 153 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 DRD4P21917 467 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 STOMP27105 288 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 APLNRP35414 380 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 CRYBB2P43320 205 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 ZNF81P51508 661 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 LCN6P62502 163 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 ERVK-25P63136 954 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 MRPS11P82912 194 aaKnown RBP5.27□□□□□ -1.57
NUP88-212ENST00000576708 PSG4Q00888 419 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 HSF2Q03933 536 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 KLF10Q13118 480 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 CYBRD1Q53TN4 286 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 C10orf128Q5T292 105 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 OTPQ5XKR4 325 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 REP15Q6BDI9 236 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 SHQ1Q6PI26 577 aaKnown RBP5.27□□□□□ -1.57
NUP88-212ENST00000576708 SLC25A47Q6Q0C1 308 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 UGT2A3Q6UWM9 527 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 C12orf54Q6X4T0 127 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 RFPL4BQ6ZWI9 263 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 SLC30A8Q8IWU4 369 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 SEMA6DQ8NFY4 1073 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 OR51F2Q8NH61 342 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 IL17DQ8TAD2 202 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 SLC25A40Q8TBP6 338 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 C10orf82Q8WW14 230 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 C11orf40Q8WZ69 217 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 LRRC58Q96CX6 371 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 MARS2Q96GW9 593 aaKnown RBP5.27□□□□□ -1.57
NUP88-212ENST00000576708 TPD52L3Q96J77 140 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 POM121L2Q96KW2 1035 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 ZNF583Q96ND8 569 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 SEPHS2Q99611 448 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 ECSITQ9BQ95 431 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 ZNF416Q9BWM5 594 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 SLC19A3Q9BZV2 496 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 OR2J1Q9GZK6 312 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 WNT5BQ9H1J7 359 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 SIAEQ9HAT2 523 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 CCNB1IP1Q9NPC3 277 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 G6PC2Q9NQR9 355 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 RHCGQ9UBD6 479 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 GRIP1Q9Y3R0 1128 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 WIPI2Q9Y4P8 454 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 SNX13Q9Y5W8 968 aa5.27□□□□□ -1.57
NUP88-212ENST00000576708 TRAV27A0A087WT01 109 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 LOC100653049A0A140TA62 436 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 LINC00854A0A1B0GVQ3 168 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 A0A1W2PPL8 197 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 J3KTA2 159 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 MRASO14807 208 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 KRT34O76011 436 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 SCAF4O95104 1147 aaKnown RBP5.26□□□□□ -1.57
NUP88-212ENST00000576708 OR5F1O95221 314 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 PNPP00491 289 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms