RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 PPP1R14BQ96C90 147 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 CMTM5Q96DZ9 223 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 CLPTM1LQ96KA5 538 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 C4orf45Q96LM5 186 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 PANX1Q96RD7 426 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 NUF2Q9BZD4 464 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 MYLK2Q9H1R3 596 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 MMP28Q9H239 520 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 RANBP3Q9H6Z4 567 aaPredicted RBP4.87□□□□□ -1.63
SMG6-219ENST00000575663 MEAF6Q9HAF1 191 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 GCM1Q9NP62 436 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 RAB18Q9NP72 206 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 BATF3Q9NR55 127 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 TUBG2Q9NRH3 451 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 TBCCD1Q9NVR7 557 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 THUMPD1Q9NXG2 353 aaKnown RBP4.87□□□□□ -1.63
SMG6-219ENST00000575663 ERVK-18Q9QC07 812 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 BTNL2Q9UIR0 455 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 FOXJ3Q9UPW0 622 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 U3KQK5 164 aa4.87□□□□□ -1.63
SMG6-219ENST00000575663 LOC100509620A0A075B734 347 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 A0A0G2JND7 137 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 A0A0G2JPF8 293 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 ELOVL7A1L3X0 281 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 HNRNPCL3B7ZW38 293 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 E9PBE3 544 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 FBP2O00757 339 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 RNF13O43567 381 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 AHCYL1O43865 530 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 BAG2O95816 211 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 F13BP05160 661 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 HNRNPCL4P0DMR1 293 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 VSIG10L2P0DP72 767 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 IDO1P14902 403 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 KITLGP21583 273 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 CALB2P22676 271 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 EEF1B2P24534 225 aaKnown RBP4.86□□□□□ -1.63
SMG6-219ENST00000575663 IDH3AP50213 366 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 DSTNP60981 165 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 HOXC5Q00444 222 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 GUCA2AQ02747 115 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 PSG7Q13046 419 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 MAPRE2Q15555 327 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 RPS26P11Q5JNZ5 115 aaPredicted RBP4.86□□□□□ -1.63
SMG6-219ENST00000575663 SPANXN4Q5MJ08 99 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 ZBTB37Q5TC79 503 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 CGB2Q6NT52 195 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 LRFN4Q6PJG9 635 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 PDZD9Q8IXQ8 264 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 LYG1Q8N1E2 194 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 CLIP4Q8N3C7 705 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 ZNF781Q8N8C0 355 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 ATG16L2Q8NAA4 619 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 ZNF420Q8TAQ5 688 aaPredicted RBP4.86□□□□□ -1.63
SMG6-219ENST00000575663 MCHR2Q969V1 340 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 NRBF2Q96F24 287 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 TMEM19Q96HH6 336 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 RCC1LQ96I51 464 aaKnown RBP4.86□□□□□ -1.63
SMG6-219ENST00000575663 MEGF10Q96KG7 1140 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 COG8Q96MW5 612 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 CCDC115Q96NT0 180 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 RBM14Q96PK6 669 aaKnown RBP4.86□□□□□ -1.63
SMG6-219ENST00000575663 CENPOQ9BU64 300 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 TMEM120AQ9BXJ8 343 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 GPR61Q9BZJ8 451 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 C20orf27Q9GZN8 174 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 C1orf21Q9H246 121 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 SIAEQ9HAT2 523 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 NDE1Q9NXR1 346 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 TAGLN3Q9UI15 199 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 ATPIF1Q9UII2 106 aa4.86□□□□□ -1.63
SMG6-219ENST00000575663 NDRG4Q9ULP0 352 aaKnown RBP4.86□□□□□ -1.63
SMG6-219ENST00000575663 TANC2Q9HCD6 1990 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 A0A1B0GVI7 797 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 WI2-2373I1.2A0A1W2PRP0 233 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 CCDC154A6NI56 674 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 CENPBD1B2RD01 187 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 ITM2AO43736 263 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 NPPAP01160 153 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 PF4P02776 101 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 OPN1SWP03999 348 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 PF4V1P10720 104 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 S100A3P33764 101 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 GUCA1AP43080 201 aaPredicted RBP4.85□□□□□ -1.63
SMG6-219ENST00000575663 KIR2DS4P43632 304 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 PCBD1P61457 104 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 ERVK-25P63136 954 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 MRPS34P82930 218 aaKnown RBP4.85□□□□□ -1.63
SMG6-219ENST00000575663 PSG4Q00888 419 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 SPATS1Q496A3 300 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 SMUG1Q53HV7 270 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 RUNDC3AQ59EK9 446 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 COQ5Q5HYK3 327 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 C16orf54Q6UWD8 224 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 NHLRC1Q6VVB1 395 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 ZNF841Q6ZN19 808 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 Q6ZR03 302 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 ZNF621Q6ZSS3 439 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 VMO1Q7Z5L0 202 aa4.85□□□□□ -1.63
SMG6-219ENST00000575663 IGFN1Q86VF2 1251 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms